Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g02901 ATGAAACATGAAACCTCGATGGAGTTTCTCTTCTCAGTTTCTTCAAATGCTATGTTCATTCTTTCTTTCTCGTTGGCATCAAACGTTTGTGGTTTTCCTACTTTCACTGTTTCCTTATGGGAAGGCGTGCACCCTGAAGTATTGATATTTACTGTGATGGGAAGACAGAGTCCTGGAAAATGGATCAGAAACTTGCTTCTGGGGAAGAGATCGTCGTCAAAGTCCAAGTCTTCAAGAGAGAAAGATATTTATAAACCTTTAAGTAACAAGGATGTTCTGGTGGTGTCTTCGGAGACATCAATGTCCTCTTCTATATCTGGTGCAAATGCTATTAAAGGAAAGCTATCAGAAAAGGAAGTAATTAGTGTATCATCAAACGATGGGGTAATTCTTGAAAATGAAGTTGAGCAGGCCAATGGAAAGTCTCTTGATGATTTTTGTTCTGAGGAACATAATGAGAAAAGCAGGCTAATAAAAACAGCAATAACAATTCAGGCTGCTATTAGAGGCTATCAGGCGCGAGGGACATATAAAACTGTAAAGGTTATCATTCCACTGCAAGCTTATATTCGTGGCCAGTTGGTTAGAAGACAAGCTATTTCTGCTTTGTATTGTGTGAAGTCAATAGTTAGATTTCAAGCATTGGCCCGTGGTTACAAGGTTAGGCACTCTGATATTGGCCTTGCAGTGCAGAAAATTTTTAAGGATACTAAATTCTCGAAATCTATTGGAGTAGTTGCATCTACACAGGCAGTGAAGCTCTCAGATAATATCTTTGCTCACAAGCTTCTGGCTTCATCACCCTCTGCTGTTTCTCCACATCTCAAATATAATACTGGTGAACCTAACTTTTGGGAATGGCTTGACCGTTGGACGAAATCACACTTTTGGGTACCTCTTCAAGAAGCGCAGAGATCTGATTCAGTGTCTGATAAGCAAAACGGAAGTTCTCAAACTGTAGAAACTAATAAGGGACAAGTTAAAAAAAATGCCAGGAAAGGACCTCATGATTTAGTCTCAGATTCCATAAAAAGTAAACGGAATCCAAAAAAGGATTCAAACCCCGCATTGCATTCAGCTAAGGAACATCCACCAAAGGAAATTGAGAAAAGGGGTTCTAGAAAATCTCAAATTCAGAATGTTTCTGATAAGTCGGAGGCTTCTAATGAGAAGACAACACACATCAGAAGAAAAGTTTCAGACCATACAAAAGTCAATGATGTTCCAGAGGCTGAAATTCAGAACATTTCACCAGAGAAGATGAAATGTTTGGCAGTGTCAAAGTCAGAAGAAGGTGATGTTGAGAAAAGTCTTACACAGCAAGCAGAAGAGCATGATAATAGTTTGATGAATGGTAAAGATGGAGGAGTGATTGAGGAGTTGAATGATGTGAAGAGTAAGAATTTCCAGAGAAGAGCTTCCCTGCCTGCTAATTTTACAGATCTTGAAAATGTGTTGCATGATAACACTCCAAGACTTCCAAGTTACATGGCTCCTACTGAATCTACAAAAGCTAAGCTAAGAGGACAGTGTTCTCCACGGTCTGTTAGTGATCTGGCAGATGTAAGCAGCATAACTCGCCGGCTTTCGCTTTCATCTTCGCTTAGCGGCAAGCTAGGTTCATTCTCTCCACGATCAGATAGATTGGCTGCCTTGACCAACAAGATAAGGACTGATAGATCTCTATCATCTTCAAGGGATGGAACTGATAAGTTGATTCAACCTCAGTGGAGAAGGTGA 1740 0.4006 MKHETSMEFLFSVSSNAMFILSFSLASNVCGFPTFTVSLWEGVHPEVLIFTVMGRQSPGKWIRNLLLGKRSSSKSKSSREKDIYKPLSNKDVLVVSSETSMSSSISGANAIKGKLSEKEVISVSSNDGVILENEVEQANGKSLDDFCSEEHNEKSRLIKTAITIQAAIRGYQARGTYKTVKVIIPLQAYIRGQLVRRQAISALYCVKSIVRFQALARGYKVRHSDIGLAVQKIFKDTKFSKSIGVVASTQAVKLSDNIFAHKLLASSPSAVSPHLKYNTGEPNFWEWLDRWTKSHFWVPLQEAQRSDSVSDKQNGSSQTVETNKGQVKKNARKGPHDLVSDSIKSKRNPKKDSNPALHSAKEHPPKEIEKRGSRKSQIQNVSDKSEASNEKTTHIRRKVSDHTKVNDVPEAEIQNISPEKMKCLAVSKSEEGDVEKSLTQQAEEHDNSLMNGKDGGVIEELNDVKSKNFQRRASLPANFTDLENVLHDNTPRLPSYMAPTESTKAKLRGQCSPRSVSDLADVSSITRRLSLSSSLSGKLGSFSPRSDRLAALTNKIRTDRSLSSSRDGTDKLIQPQWRR 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g02901 579 Gene3D - 154 203 - -
Viun3g02901 579 MobiDBLite consensus disorder prediction 387 408 - -
Viun3g02901 579 Pfam Protein of unknown function (DUF4005) 488 550 IPR025064 -
Viun3g02901 579 ProSiteProfiles IQ motif profile. 157 181 IPR000048 GO:0005515
Viun3g02901 579 SMART iq_5 179 200 IPR000048 GO:0005515
Viun3g02901 579 SMART iq_5 156 178 IPR000048 GO:0005515
Viun3g02901 579 SMART iq_5 204 226 IPR000048 GO:0005515
Viun3g02901 579 MobiDBLite consensus disorder prediction 424 450 - -
Viun3g02901 579 Pfam IQ calmodulin-binding motif 186 198 IPR000048 GO:0005515
Viun3g02901 579 Pfam IQ calmodulin-binding motif 161 174 IPR000048 GO:0005515
Viun3g02901 579 Pfam IQ calmodulin-binding motif 207 222 IPR000048 GO:0005515
Viun3g02901 579 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 222 IPR027417 -
Viun3g02901 579 MobiDBLite consensus disorder prediction 555 579 - -
Viun3g02901 579 ProSiteProfiles IQ motif profile. 181 208 IPR000048 GO:0005515
Viun3g02901 579 MobiDBLite consensus disorder prediction 326 377 - -
Viun3g02901 579 MobiDBLite consensus disorder prediction 303 325 - -
Viun3g02901 579 PANTHER IQ-DOMAIN 5-RELATED 53 536 - -
Viun3g02901 579 MobiDBLite consensus disorder prediction 303 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g02901 Viun-Chr3 35071312 35075138 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g02901 53 579 IQD Protein Family AT1G14380 31.323 1.02e-55 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g02901 - - vun:114179925 1093.18