Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g02893 ATGGCGGGGAAGTCAGAAACGGTGTCGATCCGCGTTCCTTACAAGAATCTCCACGACGATTCTTCCGCTCCCGAACTCGAACTCGAACTCGTAGATGTTGACCACCGCGGCAAGCGGATCCACGTAAACTCGCCGCCGTCAATTCACTCGCCTTCGCCGCCAAGCAACAAAGCTTCCTTGGTCAATCTCGTTCTCAGTTGCACCGTAGCCGCTGGCGTCCAATTCGGTTGGGCCTTGCAGCTCTCTCTCTTAACGCCCTACATTCAGACGTTGGGAATAGGTCATGCTTTTTCTTCTTTTATCTGGCTTTGTGGCCCCATTACAGGCCTTGTGGTTCAACCCTGCGTTGGTGTTTGGAGTGATAAATGTACATCGAAGTTCGGCAGAAGGCGGCCGTTCATTCTGGCAGGATCTCTTATGATAGCTGTGGCTGTGATATTAATCGGATTTTCTGCAGACATTGGATATGTATTAGGTGATACACACGAGCATTGCAGAACATTTAAAGGAACCCGAACAAGGGCTGCACTTGTATTTATTCTTGGGTTCTGGATGCTGGACCTTGCTAACAACACGGTGCAGGGTCCTGCTCGAGCACTTTTGGCTGATCTGTCTGGTCCTGATCAACGTAATATGGCAAATGCTATATTTTGCTCATGGATGGCAGCTGGGAACATCCTAGGATATTCTTCTGGTGCTAGTGGAAAGTGGAACAAATGGTTCCCTTTCTTGACCACAAGAGCTTGCTGCGAAGCCTGTGGCAATCTTAAGGCAGCATTTCTTGTGGCTGTGGTGTTTCTGGCATTATGCACATCTGTCACCCTATATTTTGCTGATGAGGTTCCACTTACTACTGCAAAGCAACATCACCGGTTGTCAGATTCTTCTCCTTTATTGGATGAACAACAAGAAAATGGTGTTGAATTTTCAAAATCAAGACCTTTATCTGTTATGGGTGAATCCAATGACAAGAGAACTGAAGATCACAATGGGAAAGAGGCAGAGCTAAATCATAGGAATTTCAAAGCTGGGGAAGATGATACTGAAAATGTAATGGATGGGCCTGGAGCGGTATTGGTAAACTTGTTGACAAGTTTAAGGCATTTGCCTCCTGCTATGCATTCTGTCCTGATCGTAATGGCTCTCACTTGGTTGTCATGGTTTCCCTTCTTTCTGTTTGACACGGATTGGATGGGGAGAGAAGTTTATCATGGTGATCCAAAAGGGGGCACTTCTGAAATAGATCTTTACGATCAAGGTGTTAGAGAAGGTGCATTTGGTTTGCTATTGAATTCAGTTGTCCTTGGAATTAGCTCTTTCTTCATTGAACCAATGTGTAAGTGGATGGGCACGAAATTGGTATGGGCACTGAGCAATTTTATTGTCTTTGTCTGCATGGCTGGCACTGCTATCATTAGTCTGATTTCCACTAGAAATCATTCTGGAGGGATAGAACATGTAATTGGAGCAAGTGTAGCAATCAAGATTGCTTCCTTGGTTGTTTTTGTTCTTCTTGGTTTTCCTCTTGCGATTACCTATAGTGTTCCCTTTGCTGTCACAGCAGAGTTGACTGCTGATTCAGGAGGTGGCCAAGGATTGGCCATAGGAGTTCTAAATCTTGCAATTGTTGTTCCTCAGATGATTATATCCCTTGGTTGTGGTCCCTGGGATGCTCTCTTTGGTGGTGGCAACATTCCTGCCTTTGTTCTGGCCTCATTTTGTGCTCTGGCTGGTGGTGTAATTGCAACTCTCAAACTGCCAAATCTATCTAGCAATTTCCAGTCAACAGGATTTCATGTGGGCTAG 1806 0.4546 MAGKSETVSIRVPYKNLHDDSSAPELELELVDVDHRGKRIHVNSPPSIHSPSPPSNKASLVNLVLSCTVAAGVQFGWALQLSLLTPYIQTLGIGHAFSSFIWLCGPITGLVVQPCVGVWSDKCTSKFGRRRPFILAGSLMIAVAVILIGFSADIGYVLGDTHEHCRTFKGTRTRAALVFILGFWMLDLANNTVQGPARALLADLSGPDQRNMANAIFCSWMAAGNILGYSSGASGKWNKWFPFLTTRACCEACGNLKAAFLVAVVFLALCTSVTLYFADEVPLTTAKQHHRLSDSSPLLDEQQENGVEFSKSRPLSVMGESNDKRTEDHNGKEAELNHRNFKAGEDDTENVMDGPGAVLVNLLTSLRHLPPAMHSVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGGTSEIDLYDQGVREGAFGLLLNSVVLGISSFFIEPMCKWMGTKLVWALSNFIVFVCMAGTAIISLISTRNHSGGIEHVIGASVAIKIASLVVFVLLGFPLAITYSVPFAVTAELTADSGGGQGLAIGVLNLAIVVPQMIISLGCGPWDALFGGGNIPAFVLASFCALAGGVIATLKLPNLSSNFQSTGFHVG 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g02893 601 CDD MFS_SLC45_SUC 63 582 - -
Viun3g02893 601 PANTHER SUGAR TRANSPORTER 57 584 - -
Viun3g02893 601 Pfam MFS/sugar transport protein 78 217 - -
Viun3g02893 601 FunFam Sucrose transport protein SUT5 374 594 - -
Viun3g02893 601 SUPERFAMILY MFS general substrate transporter 62 587 IPR036259 -
Viun3g02893 601 Gene3D MFS general substrate transporter like domains 59 585 IPR036259 -
Viun3g02893 601 MobiDBLite consensus disorder prediction 294 317 - -
Viun3g02893 601 MobiDBLite consensus disorder prediction 294 333 - -
Viun3g02893 601 MobiDBLite consensus disorder prediction 318 333 - -
Viun3g02893 601 FunFam Sucrose transporter SUC2 61 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g02893 Viun-Chr3 34879801 34885261 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g02893 146 601 Sucrose Transporter Gene Family AT2G02860 69.214 0.0 653
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g02893 K15378 - gmx:100793185 1080.09