Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Viun3g02888 | ATGGCTGATCCTCAGAAAACTGCTCTTGGCGAGAGAGATATCGAGCAGGCAATTACATTTCTTAAGAAAGGCTCGTATCTTCTAAAGTACGGGCGAAGAGGGAAGCCAAAGTTCTGCCCATTTAGGCTTTCCAATGACGAGTCTCTACTGTTATGGTACTCTGGCAAGGAAGAGAAACAGCTTAAGCTCGGTACAGTTTCAAGGATCATTCCAGGGCAGCGAACTGCAACATTTCAGCGGTATCCACGACCTGAGAAGGAATATCAATCATTTTCTCTTATATACAACGACAGATCCTTGGATTTGATATGCAAGGACAAAGAAGAAGCTGAAATCTGGTTTATTGGTCTTAAGGCATTAGTTACTCGAGGGAACAGTCGCAAGTGGAGATTTGAGTCGAGAACTGATGACAGTCAGTGTTCTGATAGTCCAAAATCTAGCACACGAAAATCCACTCCTTCAAATACACCATCTTCTGACCCTGGAGAAGGTGGTGGAGCTGCTTTTGATGTGAAAAATAGATGGGTTAAGGCTTTCTCCGAAATAATTTCGTTCAATGCAGCTAGCAAGGGTTCCAGTCAAGCTGAATCTGTTGCAAATTCCTCCTTATCCTCTGGTTCTGCAGATAACTCAAGCAATCGAAATTCTTCATCTGAGGCATTTCGAGTTAGTTTGTCTAGTGCTGTAAGTTCCTCCAGCCAGGGTTCTTATCATGAAGATTTTGATTCCCTAAGTGATGTTTTTATTTGGGGAGAAGGTATTGGCAATGGAATTCTTGGTGGTGTACATAGAGTTGGAGCCTTGTCTAGTTCCCAGATGGATGCTTTCCTCCCCAAGGCATTGGAATCAAAATTAGTTCTAGATGTTCAAAGTATTAGTTGTGGCTACAGACATGCTGTTCTGGTTACCAAGCAGGGAGAGATATTTAGTTGGGGAGAGGAGTCAGGAGGTAGGCTTGGACATGGTGTAGAAATGGATGTTCATCACCCTAAACTTGTTGAAGCTCTTGGTGGCTTGAATATTGAGTTAGTAGCATGCGGAGAATATCATACATGTGCTGTTACTTATTCTGGGGATCTTTATACATGGGGTGATGGTGCTCACAACTCTGGCATGCTTGGACATGGAATTGAAGCCACTTACTGGATTCCTAAGAAAGTAAGTGGTAGTTTGGAGGGTTTACGTGTATCTTATGTGTCCTGTGGACCTTGGCATACAGCTATTGTTACATCAGCTGGGCAATTGTTCACATTTGGCGATGGAACTTTTGGTGCCTTAGGACACGGAAATCATAGTAGTGCAACTATTCCTCAGGAAGTGAAAACTTTGAGAGGGTTTAGAACAACCACGGTTGCTTGTGGTGTTTGGCACACTGCTGCAGTTGTTGAGGTGATAACCGAATCTTCTACAAGCTCATCTTGTAAAAGACTTTTCACGTGGGGTGATGGAGATAAAGGCCAACTTGGACATGGTGATAAGAAACCTAGACTATTTCCTGAGTGTGTAATTGCATTGAGTGCTGAAAACATTAGCAAGGTGGCTTGTGGCCACAGTCTTACAATTGCTTTGACAACATCAGGACGTGTATATACAGTAGGAAGCACTGCTTATGGGCAACTTGGCTGTCCTGCATCCGATGGAAAAGTCCCTACGTGTGTTAAAATTGCTGACAGTTTTGTAGAAGATATTGCCTGTGGTTCATATCATGTTGCAGTCCTGACCTCCAAGGCAGAGGTTTACACATGGGGAAAGGGTTTGAATGGGCAATTAGGTCACGGAGACAATGATCACAGAAATAAACCCACACTTGTTGAGTTTTTAAAAGATAAACAAGTGAAAAGTGTTTTTTGTGGTTCAAATTTTACCGTTGCTGTATGTCTTCATAAATGGATCCCAAGTGTTGATCATTCTACATGTTTTGGATGTCGTAATTCATTTAATTTCAGAAGAAAACGTCATAATTGTTACAACTGTGGACTTGTGTTTTGCAAATCTTGCACCAGCAAGAAATCTTTAAAAGCTTCCCTTGCTCCCAATACTAGTAAGCCGTATCGAGTTTGTGAGGACTGTTATCTCAAACTTAAAAAATCTGCTGAGTCAGTACCCTTGGTGCAAAGCCCTAGTTTGAGAAGTGTAAGTTTGCAAGATAACAAAATCACTAAAATACAGGGAACACTATTGAGGCTTTCATCTTTTGGTTCTATTCTTCAAACAGTAAGTGGTCAATCGAAGCTTCCAGATTCACAAGATATCCATCGTTCCCCGGCTTCAAATGGAAAATTAGAGACGAGGGGTTTTGCTTCTTCAAAATCATCAAATTCTGTTTTTGTGGATTCTAAGAAACACTTTTCATTTTCTGAGCCTGCTGCAAGAATATCTTGTCAATCAACATCTCCAGCTTCATCAAAGTCAAGTCCAAGAGAATCGTATGAAGATATCAATGATGATTTAAAGCAAAGAAATGATATTTTAAGTCAAGAAGTTATAAGTTTAAGGACTCAGGTTGAAGATCTTACTCGAAAATCGAAAAGTTTAGAGGCTGAACTTGAGAGAACATCAAAGCAATTGAAGGAAGTGACTACAGTAGCTGCAGATGAAGCTGGAAAGTGTAAATCAGCAAAAGAGGTCATAAAATCATTGACTGCACAGTTAAAGGAAATGGTGGAAAGGCTGCCAGAAGGACACAATGCTGACTGCAGTACAGAGCTCTGTGCTGAAACCACTAAAAATATTCTAGATCATTCCTTGGATGTGAGCCATATAAGAAACACTGCCATGCTACAAAATGAAGGCAGCAGCAATGTAGCAAATCTGATATTACCTAATGGTGCCAAAACACAAAGTGGAAAGGCAGAGTGGGTAGTGCAAGATGAACCAGGTGTGTTCGTACGTTTGTCTCTCCTGCCAGGTGGTGGTAATGAGCTTAAGCGTGTTCGCTTCAGTCGAAAGCATTTCACAGAAGAAGAAGCTGAGAAGTGGTGGACGGAAAATGGAAGCAAAATATTGGAGCGGCACAACATAGTTGCTCTATAG | 3033 | 0.4141 | MADPQKTALGERDIEQAITFLKKGSYLLKYGRRGKPKFCPFRLSNDESLLLWYSGKEEKQLKLGTVSRIIPGQRTATFQRYPRPEKEYQSFSLIYNDRSLDLICKDKEEAEIWFIGLKALVTRGNSRKWRFESRTDDSQCSDSPKSSTRKSTPSNTPSSDPGEGGGAAFDVKNRWVKAFSEIISFNAASKGSSQAESVANSSLSSGSADNSSNRNSSSEAFRVSLSSAVSSSSQGSYHEDFDSLSDVFIWGEGIGNGILGGVHRVGALSSSQMDAFLPKALESKLVLDVQSISCGYRHAVLVTKQGEIFSWGEESGGRLGHGVEMDVHHPKLVEALGGLNIELVACGEYHTCAVTYSGDLYTWGDGAHNSGMLGHGIEATYWIPKKVSGSLEGLRVSYVSCGPWHTAIVTSAGQLFTFGDGTFGALGHGNHSSATIPQEVKTLRGFRTTTVACGVWHTAAVVEVITESSTSSSCKRLFTWGDGDKGQLGHGDKKPRLFPECVIALSAENISKVACGHSLTIALTTSGRVYTVGSTAYGQLGCPASDGKVPTCVKIADSFVEDIACGSYHVAVLTSKAEVYTWGKGLNGQLGHGDNDHRNKPTLVEFLKDKQVKSVFCGSNFTVAVCLHKWIPSVDHSTCFGCRNSFNFRRKRHNCYNCGLVFCKSCTSKKSLKASLAPNTSKPYRVCEDCYLKLKKSAESVPLVQSPSLRSVSLQDNKITKIQGTLLRLSSFGSILQTVSGQSKLPDSQDIHRSPASNGKLETRGFASSKSSNSVFVDSKKHFSFSEPAARISCQSTSPASSKSSPRESYEDINDDLKQRNDILSQEVISLRTQVEDLTRKSKSLEAELERTSKQLKEVTTVAADEAGKCKSAKEVIKSLTAQLKEMVERLPEGHNADCSTELCAETTKNILDHSLDVSHIRNTAMLQNEGSSNVANLILPNGAKTQSGKAEWVVQDEPGVFVRLSLLPGGGNELKRVRFSRKHFTEEEAEKWWTENGSKILERHNIVAL | 1010 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Viun3g02888 | 1010 | ProSitePatterns | Regulator of chromosome condensation (RCC1) signature 2. | 451 | 461 | IPR000408 | - | |
| Viun3g02888 | 1010 | FunFam | PH, RCC1 and FYVE domains-containing protein 1 | 216 | 466 | - | - | |
| Viun3g02888 | 1010 | Gene3D | - | 176 | 368 | IPR009091 | - | |
| Viun3g02888 | 1010 | Gene3D | - | 369 | 470 | IPR009091 | - | |
| Viun3g02888 | 1010 | Pfam | Transcription factor regulating root and shoot growth via Pin3 | 950 | 1005 | IPR013591 | - | |
| Viun3g02888 | 1010 | Gene3D | - | 471 | 642 | IPR009091 | - | |
| Viun3g02888 | 1010 | ProSitePatterns | Regulator of chromosome condensation (RCC1) signature 2. | 292 | 302 | IPR000408 | - | |
| Viun3g02888 | 1010 | CDD | PH_PLC_plant-like | 12 | 122 | - | - | |
| Viun3g02888 | 1010 | SUPERFAMILY | PH domain-like | 13 | 121 | - | - | |
| Viun3g02888 | 1010 | Pfam | FYVE zinc finger | 629 | 695 | IPR000306 | GO:0046872 |
Showing 1 to 10 of 45 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Viun3g02888 | - | - | pvu:PHAVU_003G066900g | 1532.69 |
Showing 1 to 1 of 1 entries