Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g02815 ATGTCGACATCCGACATACTGAACCCCATTTCACTTGATGAAATAAGTTTATGGAACAACGATATAGTCCAGCAGGAAACATTACCGGATTCTATTGCTTGTCATACCCAAGAAGATGAATTAAATGAGGTTCCTATGGTTGGAATGATTTTTGAAACAACCGACAAGGTTAAAGAGTTTTACAAGCAATACGCCATAAGATGTGGATTTGGTGTCCGTGTGAGAAGTTCAAGTAAAGGAGAAGACAATGAATTATGCTTTGTCAAATTGGTCTGTAGCCGTGAAGGAAACTACGTGTCCACCATCCCTCCGGAATTGAAAAGCCAACCAACAAAAATCAAGAATTGTGGTGCAAGGATAACAGCAGTTAAAAAGGGAGGTCAGTGGCACATAAAGAATGTCATACTTGATCACAATCATGACCTAAGCTCTATGAAGTCAAGAATAATTCGCGGCAACAAAAAATTGAACATGCAAGTCAAGCAAACACTCGATATGAATGATGAAGCAGGTGTGCGCATTAACAAAAGCTTCCAATCACTGGTTTGTGATGTTGGCGGATTTGAGAACCTTCCTTTTGTCGAGCGTGACGTTAGAAATTATATCGGATGA 612 0.3971 MSTSDILNPISLDEISLWNNDIVQQETLPDSIACHTQEDELNEVPMVGMIFETTDKVKEFYKQYAIRCGFGVRVRSSSKGEDNELCFVKLVCSREGNYVSTIPPELKSQPTKIKNCGARITAVKKGGQWHIKNVILDHNHDLSSMKSRIIRGNKKLNMQVKQTLDMNDEAGVRINKSFQSLVCDVGGFENLPFVERDVRNYIG 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g02815 203 Pfam FAR1 DNA-binding domain 59 143 IPR004330 -
Viun3g02815 203 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 33 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g02815 Viun-Chr3 33087442 33088053 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Viun3g02815 FAR1 7.8e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g02815 - - vun:114175344 414.846