Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g02806 ATGGTTGGCGGTGGAAATGGAGAGGGAGCACCACACTCCACGGCGGCGCGTCCCAGAAGTGATCTCCGCCCACGCGCTACCGCAGAGAGCGTTTTCAACGGCGGGGACACCGCGGGGTATAGCCCCGATCCCCTGACTCTGCTTTCTAGCTTGTTCGGCGACGGCGATGAGTATAAATCGTTCTCGGAGTTTCTTGCCGGCGCTATGATGGACCCCACCCCTCCTCGGTTCTTTCCCGATTCATCTACTCAAGGACACTTTGGAATGACACAGCAGCAAATTGAAGCTGAACATCCATTCTCTGCAGCAGCACTTCCTGCCACCTCTCTGACACAGCACCTGATACCACAACCCGCATCAGTGCCAGCTTCTGTGATGACAGAATCCTTTGGTTTTTCTCACTCTGACAAAAAGTTACAGTCTTCCGCTGTCATTGTTGAGAAGCCTAATGATGATGGCTACAACTGGAGGAAGTATGGGCAGAAACATGTAAAGGGTAGTGACTTCTCTCGAAGTTATTACAAATGCACACATCCAAATTGTCCTGTTAAGAAAAAGCTTGAGCGATCTCTTGAGGGTCATGTAACTGCAATTATCTACAAAGGAGAGCACAACCATCAACGTAAGACCACAAAAGGCACCCTAACAACATCAACTGAGAATTCATCAGATAGGTTGAAAGAAGAGATGAGTTCTCAGTCGGTGTCTCAGATGGATCTAGAATCTGGAACAAGTGACAGTGAGGAAGTAGGTGATCATGAAACTGAAGTGGATCAGAAAAATGATGAACCTGATCCCAAGAGGAGAAACACAGAAGCCAGATTCCAGGATCCAGCCTCTTTGCATAGAACTGTGGCAGAGCCCAGAATCATAGTGCAAACAACAAGTGAAGTGGATCTGTTGGATGATGGATATAGATGGCGCAAATATGGGCAGAAAGTTGTCAAAGGAAACCCATATCCAAGGAGCTATTACAAGTGCACGACCCCAGGTTGCAATGTTCGGAAGCATGTTGAGAGGGCTTCGACGGATCCTAAAGCTGTAATAACAACATATGAAGGAAAACATAATCATGATGTACCAGCAGCTAAGACTAATAGTCACACACTTGCAAACAATAGTTCATCACAGCTGAAACCACAGAATGCCATTACTGATGAGAAGAAGCATAGTTTCAGTAGCAGAGGTGTTGGGGGCAGTGAGCAACGACCAGTGCCAAGTCTAAGACTGAAGGAAGAACAGATAACTTAG 1251 0.47 MVGGGNGEGAPHSTAARPRSDLRPRATAESVFNGGDTAGYSPDPLTLLSSLFGDGDEYKSFSEFLAGAMMDPTPPRFFPDSSTQGHFGMTQQQIEAEHPFSAAALPATSLTQHLIPQPASVPASVMTESFGFSHSDKKLQSSAVIVEKPNDDGYNWRKYGQKHVKGSDFSRSYYKCTHPNCPVKKKLERSLEGHVTAIIYKGEHNHQRKTTKGTLTTSTENSSDRLKEEMSSQSVSQMDLESGTSDSEEVGDHETEVDQKNDEPDPKRRNTEARFQDPASLHRTVAEPRIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTTPGCNVRKHVERASTDPKAVITTYEGKHNHDVPAAKTNSHTLANNSSSQLKPQNAITDEKKHSFSSRGVGGSEQRPVPSLRLKEEQIT 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g02806 416 MobiDBLite consensus disorder prediction 363 382 - -
Viun3g02806 416 MobiDBLite consensus disorder prediction 202 282 - -
Viun3g02806 416 Gene3D WRKY domain 286 362 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun3g02806 416 Gene3D WRKY domain 137 208 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun3g02806 416 MobiDBLite consensus disorder prediction 1 39 - -
Viun3g02806 416 ProSiteProfiles WRKY domain profile. 145 209 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun3g02806 416 ProSiteProfiles WRKY domain profile. 296 361 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun3g02806 416 FunFam WRKY transcription factor 33 288 354 - -
Viun3g02806 416 MobiDBLite consensus disorder prediction 356 416 - -
Viun3g02806 416 MobiDBLite consensus disorder prediction 228 244 - -
Viun3g02806 416 SUPERFAMILY WRKY DNA-binding domain 293 361 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun3g02806 416 MobiDBLite consensus disorder prediction 246 276 - -
Viun3g02806 416 Pfam WRKY DNA -binding domain 151 207 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun3g02806 416 Pfam WRKY DNA -binding domain 302 359 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun3g02806 416 SUPERFAMILY WRKY DNA-binding domain 148 208 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun3g02806 416 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 113 381 IPR044810 GO:0003700
Viun3g02806 416 SMART WRKY_cls 150 208 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun3g02806 416 SMART WRKY_cls 301 360 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun3g02806 416 FunFam WRKY transcription factor 137 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g02806 Viun-Chr3 32911001 32913436 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g02806 15 65 WRKY Transcription Factor Family AT2G03340 50.980 7.11e-09 55.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Viun3g02806 WRKY 9.5e-26 CL0274