Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g02744 ATGTCTGTTATCCAAAAACACACTCACTCTTTACAAGAACTAAACCCTGAGAAGGAGAGTTGGAATATCCTTGCAAGAGTTGTATGGTTATGGTTTGTTGAAGATTACACAAAAGGAAAAACTCAATTTTCCATGGAAATTGTTCTTCAAGACCAAGAGGGTGTACTAATCCATGCATTTGTTAGACGCACATTGATATACAAATTCCAGTCTGAAATCAAAGAGGACAAGGTTTACACCATCCAATCTTTGAGTGTTTCATGTAATGGTGGTTCTTATAGAACCACAAAACATGCCTATAAGATCAACTTCCAATTTGAAACCAAGGTCAATATGGTTCAAAGTACCTTAGTTCCGAAAACTACAACTTCATACACCCCTTTTTCAACAATCATAGCTGCTGGTTTTGACACAGATTACTTAGTTAATGTGATTGGGATGTTTACTGGTGTTGGAATAGAGAGGGAGCTAGAGAAAGCTGGTAAGAAAACCAAAATGAATGTCATCCTTATGGAAGCTGATGGGATGTGGGATAATACTGAATCTCCTTCTCAAGCTCTTACCCAACTTTGTGCTTCTTCTAAAGTTAGCTTAGAAGATGATTTCATTAAGTTGCATCCTAGGAGTTCAATTGAAGGAAAGTACTTTTGTAGTAAAAGCTACTATCAAACATGTGCTAGATCATGA 687 0.3668 MSVIQKHTHSLQELNPEKESWNILARVVWLWFVEDYTKGKTQFSMEIVLQDQEGVLIHAFVRRTLIYKFQSEIKEDKVYTIQSLSVSCNGGSYRTTKHAYKINFQFETKVNMVQSTLVPKTTTSYTPFSTIIAAGFDTDYLVNVIGMFTGVGIERELEKAGKKTKMNVILMEADGMWDNTESPSQALTQLCASSKVSLEDDFIKLHPRSSIEGKYFCSKSYYQTCARS 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g02744 228 Pfam Domain of unknown function DUF223 46 141 IPR003871 -
Viun3g02744 228 CDD RPA1_DBD_A_like 26 110 - -
Viun3g02744 228 Gene3D - 6 112 IPR012340 -
Viun3g02744 228 SUPERFAMILY Nucleic acid-binding proteins 8 112 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g02744 Viun-Chr3 29702942 29704415 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g02744 3 151 Core DNA Replication Machinery Family AT5G08020 24.026 1.19e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g02744 - - vun:114175280 460.685