Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g02734 ATGAAGCTGCGGCTGCGAATCCTCCTCATTTCTCTGTTGTTGTGCGTCCCATTTTCCTCCTCTTCGAAGCCCAAGGACCCGTTCCTTGGAATCGCTCCCGAAGATGACAAGTATTATAGAGCTTCCGATGTTATAAGATGTAAAGATGGATCCGGAAAATTCACCAAGGCGCAGCTCAATGATGATTTTTGCGATTGCGCTGATGGCACCGATGAGCCGGGTACATCGGCGTGTCCGGCTGGAAGATTTTTTTGTCGGAATGCAGGGCATTCTCCTGTTGACTTGTTTTCATCCAGAGTGAATGATGGAATATGCGATTGCTGTGATGGAACTGACGAATATGATGGTAAAGTAAAGTGTCCAAATACCTGCTGGGAGGCTGGGAAAGTGGCTCGAGATAGACTGGAAAAAAAGATTGCAACTTATCAAGAGGGTGTCAAATTGCGAAAGCAAGAAATTGAACAAGCTAAAGTGGCTATTGAGAAGGATGAGTCAGAACTTTCACAATTAAAAAAGGAAGAAAGTATACTTAAAGTGATTGTAAAACAGCTAAAAGATCATAAAGAACAAATAGAGAAGGCAGAGGAGAAAGAACGTTTACAGAAAGAAAAGGAAGAGATGCAGAAAAAGGAGTCTGAGAAGAAGGCTGATGAAACAATAGATAAAACTGATGAAGATATGGGGAATAAAAATGAAGCTGGAAAGCATTCGGAGGTAGAAGATAATGGTGTAGAAAATAATCATGATAAAATAGAAAATCTAGAGGGTTCTCATGCAGATCAGGATGAAGCAGGAAAGAAATTAGCAGATGTACTTGATAATGATGATCGAGACAGAGATGCTCCTGGAACTGAAGGATCTTTGCATAATATAGTGGAAGAAGAGAATGCAAAGAAATCCAATGAAGAACCTGTTGTTAAGTCTGAGGCCAATGATAAGGTTGGAAACGAAGTGTCCTCTGATGAAAACGTCAATAAGGGAAATGACGTAACTGAAAACACCGAGGGATTATCAAGGGAAGAGTTGGGCCGGCTTGTTGCTTCGCGTTGGACAGGAGAAAATACTGATGTCCAAAGTGATGAAACTGATACTAAATTAGACAAAGAAGATCTTCCAATGGAGACAAAAAAGGACGAATATGAAGGCTATGTTTCTGAAACTGATGATGAGAGCAACAGATATGATGATGATATCCACAAATATGATGATGAAGATGACGTTGATGAGGAATATCAAGAGGACGAGCATGATGATGACCTTAGTTCATATAAATCTGATTCTGATAATGAACCAGACTTATCAGATAATCCTTCTTGGTTAGAGAAAATACAGAAAACTGTACGAAATCTTTTTCAGGCTGTCAACTTATTCCAGGCTCCAGTGAATCAGTCAGATGCTGCTCGTGTACGCAAGGAATATGATGAATCAAGTGCCAAATTGTCTAAAATACAGTCTAGAATATCAAGTCTGACGCAAAAGCTAAAACATGATTTTGGCCCAGCAAAGGAGTTTTATACATTCTATGATCAGTGCTTTGAGGGCAAGGAGAACAAGTACACTTACAAAGTCTGCCCCTATAAACAGGCTTCTCAAGAGGAGGGTTATTCCACCACCCGTTTGGGTCGCTGGGACAAATTTGAGGATTCATACAAAGTAATGGTGTTTTCTAATGGTGATAAATGCTGGAATGGTCCTGATCGGAGTTTGAAGGTCAAGCTAAGATGTGGGTTGAAAAATGAGATTACTGATGTAGATGAACCAAGCCGTTGCGAATATGTAGCTTTATTATCTACTCCAGCCCTGTGTCAAGAGGAAAAGCTAGAGGAGTTACAACACAAGCTAGAGATATTGAATACGCAACAACCAGCAAACCATGATGAGTTGTGA 1887 0.4038 MKLRLRILLISLLLCVPFSSSSKPKDPFLGIAPEDDKYYRASDVIRCKDGSGKFTKAQLNDDFCDCADGTDEPGTSACPAGRFFCRNAGHSPVDLFSSRVNDGICDCCDGTDEYDGKVKCPNTCWEAGKVARDRLEKKIATYQEGVKLRKQEIEQAKVAIEKDESELSQLKKEESILKVIVKQLKDHKEQIEKAEEKERLQKEKEEMQKKESEKKADETIDKTDEDMGNKNEAGKHSEVEDNGVENNHDKIENLEGSHADQDEAGKKLADVLDNDDRDRDAPGTEGSLHNIVEEENAKKSNEEPVVKSEANDKVGNEVSSDENVNKGNDVTENTEGLSREELGRLVASRWTGENTDVQSDETDTKLDKEDLPMETKKDEYEGYVSETDDESNRYDDDIHKYDDEDDVDEEYQEDEHDDDLSSYKSDSDNEPDLSDNPSWLEKIQKTVRNLFQAVNLFQAPVNQSDAARVRKEYDESSAKLSKIQSRISSLTQKLKHDFGPAKEFYTFYDQCFEGKENKYTYKVCPYKQASQEEGYSTTRLGRWDKFEDSYKVMVFSNGDKCWNGPDRSLKVKLRCGLKNEITDVDEPSRCEYVALLSTPALCQEEKLEELQHKLEILNTQQPANHDEL 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g02734 628 Coils Coil 153 222 - -
Viun3g02734 628 MobiDBLite consensus disorder prediction 401 416 - -
Viun3g02734 628 MobiDBLite consensus disorder prediction 356 400 - -
Viun3g02734 628 Gene3D - 504 602 IPR009011 -
Viun3g02734 628 Pfam Glucosidase II beta subunit-like protein 470 625 IPR036607 -
Viun3g02734 628 MobiDBLite consensus disorder prediction 317 332 - -
Viun3g02734 628 Coils Coil 600 620 - -
Viun3g02734 628 Coils Coil 466 486 - -
Viun3g02734 628 MobiDBLite consensus disorder prediction 195 284 - -
Viun3g02734 628 MobiDBLite consensus disorder prediction 291 316 - -
Viun3g02734 628 Pfam Glucosidase II beta subunit-like 23 172 IPR028146 -
Viun3g02734 628 PANTHER N-LINKED OLIGOSACCHARIDE PROCESSING 7 628 IPR039794 -
Viun3g02734 628 SUPERFAMILY Mannose 6-phosphate receptor domain 509 602 IPR009011 -
Viun3g02734 628 MobiDBLite consensus disorder prediction 417 431 - -
Viun3g02734 628 MobiDBLite consensus disorder prediction 195 437 - -
Viun3g02734 628 ProSiteProfiles MRH domain profile. 509 604 IPR044865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g02734 Viun-Chr3 28954411 28970499 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g02734 19 628 Calmodulin-binding Proteins AT5G56360 56.426 0.0 627
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g02734 K08288 - gmx:100807083 984.556