Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g02727 ATGTCTTCTCGCAGATCAAACGGAAGAGTAGGTAGTGGTAGAGATGCATTAGAAAATGAAGTCCCCTTGCCGCCGCTGCCTGATCATACAACAAATTTGCAATGGGGTGAAGTTAAACCACTTTCAGGAAAACCATACTTTTATAGTATTCTTGCAAATTCAAATCTCTATCCCCGTTATTATATGTGGCCTGCGAGGAACTTTCGGTTAGAACTTCCTTCTTGTGAGGTCCCCACCATTCTCACCTATATGGGCAAGAGCTGGGACATGGTGTATCATGGAAAAAGGAAACTGCCGGTTTTTAGTCCAGCAGGATGGAAAAAGTTTGCTGTTGAAAATTGTTTGAGGGTTGAAGATGCATGCATTTTTGAGCTGATGGAAAGCAGTGACAAGAGAGTCATCTTTGAAGTTCAAATTCTTAGATGTGACATCCCATCTGAAATTCTTGAAAATGAAATGATGATGGGTCAGAGTCGAGAAATGCCAATTGTCCTTTACTAG 501 0.4132 MSSRRSNGRVGSGRDALENEVPLPPLPDHTTNLQWGEVKPLSGKPYFYSILANSNLYPRYYMWPARNFRLELPSCEVPTILTYMGKSWDMVYHGKRKLPVFSPAGWKKFAVENCLRVEDACIFELMESSDKRVIFEVQILRCDIPSEILENEMMMGQSREMPIVLY 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g02727 166 Pfam B3 DNA binding domain 79 135 IPR003340 GO:0003677
Viun3g02727 166 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 43 145 IPR044837 -
Viun3g02727 166 CDD B3_DNA 45 141 IPR003340 GO:0003677
Viun3g02727 166 SUPERFAMILY DNA-binding pseudobarrel domain 43 141 IPR015300 -
Viun3g02727 166 Gene3D - 37 143 IPR015300 -
Viun3g02727 166 ProSiteProfiles B3 DNA-binding domain profile. 85 143 IPR003340 GO:0003677
Viun3g02727 166 MobiDBLite consensus disorder prediction 1 25 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Viun3g02727 B3 4e-09 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g02727 - - gmx:100804948 223.402