Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g02722 ATGGAGTTCGAGGTGAAGGTGGTGGGAGGCATAGACTCCTGTTTTGTATCCCTTCCCCTCTCACTCATCCAAACTCTTCAGTCAACGCGCTCGACACCGCTTCCTGAAATCCTCGCTCTCGAGCTTCGCTCTCCTCCTCACACCTGGTTCGTCTCTTGGTCCGGCGCCACTTCTGATTCTTCCGCCATAGAGGTTTCTTCTCGATTTGCGGAGTGCATTTCCTTGCCGAATCACGCTACTGTTCAAGTGAGAGCTGCTCCCAATGTGCCGCACGCTTCTCTCGTCACCATAGAGCCGAACACGGAGGATGACTGGGAAATTTTGGAGCTCAACGCCGACCTAGCCGAGGGTATAATCCTCAACCAGGTCAGGATTGTCTATGAAGGGATGAGATTTCCTTTGTGGTTGCATGGTCATACTGTCATCACATTTCAAGTGGCTTCTGTTGATCCGAAGAATGTGGTGGTGCAACTAATGCGAAAAACTAAAGTTGCTGTTGCTCCAAAAAGCCGCAAAAGAAGTTTGGATTCACCAGGAGATTCACGTCAAGACTCCTCTAATAAAGAACACACTTCTAAGATGCTGCTTCGTTTACAAGATCCAAAAGGATTATGTAGTACCAGTACTCATGTCCAAGGAGTTGACCTTAATGTAGGGCTTACTACTGTTGCTTTTGTTCACCCTGAAACAGCCAAAAAATACTCATTCAGCATGCTTCAGTTGGTTTTGATAGTACCCAGAGTTTCCAAGGAAAACGTTAACATTTCAAGAACTAATATTATGAAAAACAGAGGTGGTTCAAGTACTAATGAAGCTGAAAATGTATATACTGACAATATAGAATATCGACAAGCAATTGTTCAGTTGATGATTTCAGAATCTGTGGGTGAAGGACATGTGATGGTAGCTAAGTCTCTTCGCCTTTATTTGAGAGCTAGCCTACGTTCATGGGTTTATTTGAAGGCATGCAATACTATTCTGGAAAAAAATATTCCTTCAACCTCTCTTTTTCCGTGTCAATTCAAACTACTAAGTCAGGAGAATTCTGTTGAGAAAGATGGTCTAAAAGTTTCTCATGACCGGAATAATCACATTGATAAAAAAGTCCAAGCGAAAGCTGCATCAGGTTTATTTGTGGATACTATAGATTGGTCAATCCAAAATAAAGTTCTAGAAGCTGTCTCCTATGAATCCAATTACAAAGCAGAGGAAGAAACTACAAATCAATCGCAGAATCACAGGGGATTACAGAATCTTGTAAGACTATGGTATATCACACAACTTAAGGCAATTACTTCTATTTCAGGTATGGAGGTTAGTTCCTTGATTATGGGTGATAAAACCTTGCTTCATTTTGAAGTAAGCTGTTACAAGCTTGGGAGTGATGGGAAGGCTCAGTTCGCCTATAGTCCTTCAGAGAATAGTAGCAATGCAGCTGAATTGTTGTTTTTATTGACATTTGGTGAAGAATATCTGCATAATGGGAAACTTCGTGCATATGAAGTTGGTCTTGGTGGAGAACATGATAACATTAATGTTGTGGACCTGAAGGTTTTTGAAAGGATGAAATTGTGTGATCCTGTGTCTATTATTTCTATAGAAGAGAGAACGTCTGAAGACAACATTAATTCAAATCTATCTCCCCTTGGCTGGATGGAGAAAACTGCGGATGATGTTATCAACAGAATGTTGATATTGTTATGTTCGGCATCTGGTTTGTGGTTTGGCTCACACAACTTGCCACTCCCTGGACATGTTCTCATATATGGACCACCTGGCTCTGGGAAAACTATATTAGCAAGAACTGTGGCAAAATCCCTTGAGAACCACGAAGACATCTTTGCACACATAATTTTTATTTCCTGCTCAAAATTTGCCCTTGAGAAGGTCCCAGTTATTCGCCAAGAACTTGCAAACCATGTAACTGAAGCTTTAAACCATGCTCCTTCTGTGGTTATCTTTGATGATCTTGATAGCATAATTTCTTCCCCTGACTCTGAAGGATCTCAGCAGTCAATATCTGTTGCTGGACTCACAGATTTTCTGGTTGACATCATGGATGAATATGGGGAGAAGAGGCAAAAATCATGTGGATTCGGACCAATAGCCTTCATAGCTTCTGCACAATCACTAGAAAAGATACCACAATCTTTAAGCTCTTCAGGAAGGTTTGACTTTCACATAAAGCTTCCTGCTCCTGCAGCCTCTGAGCGCAGGGCTATGTTGAAGCATGAAATACAGAGGCGTCACTTGCAGTGCGATGATGAGATCCTGCTTGACGTGGCTGTAAAATGTGATGGTTATGATGGTTATGATTTGGAAATATTAGTTGACAGAACTGTTCATTCTGCTGTTCGCCGTTTTCTGCCATCTAATGCTTCCATTGATGTGCATGAGAGTCCAGCTATACTAAGGGAGGATTTCTCTCAGGCAATGCTTGATTTTCTTCCAGTTGCAATGCGTGATATTACAAAATCAGCTTCTGATGATGGCCGTTCTGGATGGGATGATGTGGGTGGTCTTGTTGACATTCGAAATGCTATTAAGGAGATGATAGAGCTGCCATCAAAGTTTCCAAAAATTTTTGCACAAGCACCTTTGAGGTTACGGTCAAATGTCCTTTTATATGGTCCTCCTGGTTGTGGCAAAACTCACATAGTTGGTGCTGCTGCTGCTGCTTCTTCACTTCGATTCATATCAGTAAAAGGGCCAGAGCTGTTAAACAAGTACATTGGTGCTTCTGAACAAGCTGTTAGGGATATTTTCTCTAAAGCAGCAGCTGCAGCACCATGTCTACTTTTTTTTGATGAATTTGATTCTATTGCCCCCAAGAGAGGGCATGACAATACTGGAGTAACTGATCGAGTTGTTAATCAATTTTTGACTGAGTTAGATGGTGTTGAGATTTTAACTGGTGTATTTGTGTTTGCTGCAACAAGTAGACCAGATTTACTTGATGCTGCACTGTTGAGACCTGGTAGGTTAGATCGTCTTCTATTCTGTGACTTTCCATCATGGCACGAGAGATTGGAAATTATTGCTGTACTTTCTAGAAAGTTGGCAATGGACAAAGATATTGATTTGACTACAATAGCTAATATGACTGAGGGATTCAGTGGAGCTGATCTCCAAGCTCTCCTCTCAGATGCGCAGCTTGCAGCAGTTCATGATGTTCTGGACAACGTGGATGCCTTAAGGACAGAAAAAACACCCGTTATTACTGATGCTCTTCTAAAGTTCACAGCATCCAAGGCTAGACCATCTGTTTCAGAAGAAGAGAAGAGAAGACTCTACAATATATATCACCAGTTCCTGGATTCAAAGAGATCTGTCGCTGCCCAGTCAAGAGACTCGAAAGGAAAGAAGGCAACTTTAGCTTGA 3381 0.4176 MEFEVKVVGGIDSCFVSLPLSLIQTLQSTRSTPLPEILALELRSPPHTWFVSWSGATSDSSAIEVSSRFAECISLPNHATVQVRAAPNVPHASLVTIEPNTEDDWEILELNADLAEGIILNQVRIVYEGMRFPLWLHGHTVITFQVASVDPKNVVVQLMRKTKVAVAPKSRKRSLDSPGDSRQDSSNKEHTSKMLLRLQDPKGLCSTSTHVQGVDLNVGLTTVAFVHPETAKKYSFSMLQLVLIVPRVSKENVNISRTNIMKNRGGSSTNEAENVYTDNIEYRQAIVQLMISESVGEGHVMVAKSLRLYLRASLRSWVYLKACNTILEKNIPSTSLFPCQFKLLSQENSVEKDGLKVSHDRNNHIDKKVQAKAASGLFVDTIDWSIQNKVLEAVSYESNYKAEEETTNQSQNHRGLQNLVRLWYITQLKAITSISGMEVSSLIMGDKTLLHFEVSCYKLGSDGKAQFAYSPSENSSNAAELLFLLTFGEEYLHNGKLRAYEVGLGGEHDNINVVDLKVFERMKLCDPVSIISIEERTSEDNINSNLSPLGWMEKTADDVINRMLILLCSASGLWFGSHNLPLPGHVLIYGPPGSGKTILARTVAKSLENHEDIFAHIIFISCSKFALEKVPVIRQELANHVTEALNHAPSVVIFDDLDSIISSPDSEGSQQSISVAGLTDFLVDIMDEYGEKRQKSCGFGPIAFIASAQSLEKIPQSLSSSGRFDFHIKLPAPAASERRAMLKHEIQRRHLQCDDEILLDVAVKCDGYDGYDLEILVDRTVHSAVRRFLPSNASIDVHESPAILREDFSQAMLDFLPVAMRDITKSASDDGRSGWDDVGGLVDIRNAIKEMIELPSKFPKIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAASSLRFISVKGPELLNKYIGASEQAVRDIFSKAAAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEILTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSWHERLEIIAVLSRKLAMDKDIDLTTIANMTEGFSGADLQALLSDAQLAAVHDVLDNVDALRTEKTPVITDALLKFTASKARPSVSEEEKRRLYNIYHQFLDSKRSVAAQSRDSKGKKATLA 1126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g02722 1126 Gene3D - 734 813 - -
Viun3g02722 1126 Gene3D - 834 1096 IPR027417 -
Viun3g02722 1126 Pfam ATPase family associated with various cellular activities (AAA) 586 731 IPR003959 GO:0005524|GO:0016887
Viun3g02722 1126 Pfam ATPase family associated with various cellular activities (AAA) 873 1000 IPR003959 GO:0005524|GO:0016887
Viun3g02722 1126 SUPERFAMILY Cdc48 domain 2-like 90 168 IPR029067 -
Viun3g02722 1126 MobiDBLite consensus disorder prediction 167 191 - -
Viun3g02722 1126 FunFam Nuclear valosin-containing protein-like 831 1009 - -
Viun3g02722 1126 FunFam Peroxisome biogenesis protein 1 539 733 - -
Viun3g02722 1126 Gene3D - 90 170 - -
Viun3g02722 1126 FunFam Peroxisome biogenesis factor 1 90 169 - -
Viun3g02722 1126 Pfam Peroxisome biogenesis factor 1, N-terminal 95 168 IPR015342 GO:0005524|GO:0005777|GO:0007031
Viun3g02722 1126 MobiDBLite consensus disorder prediction 169 191 - -
Viun3g02722 1126 SUPERFAMILY ADC-like 10 85 IPR009010 -
Viun3g02722 1126 ProSitePatterns AAA-protein family signature. 973 991 IPR003960 GO:0005524|GO:0016887
Viun3g02722 1126 CDD RecA-like_PEX1_r2 844 1001 - -
Viun3g02722 1126 Gene3D - 1004 1083 - -
Viun3g02722 1126 PANTHER AAA-FAMILY ATPASE 231 1101 - -
Viun3g02722 1126 SMART AAA_5 582 734 IPR003593 GO:0016887
Viun3g02722 1126 SMART AAA_5 869 1005 IPR003593 GO:0016887
Viun3g02722 1126 FunFam PeRoXisome assembly factor 1004 1079 - -
Viun3g02722 1126 Pfam AAA+ lid domain 1025 1062 IPR041569 -
Viun3g02722 1126 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 835 1100 IPR027417 -
Viun3g02722 1126 Gene3D - 531 733 IPR027417 -
Viun3g02722 1126 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 563 811 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g02722 Viun-Chr3 28787151 28813362 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g02722 586 801 Calmodulin-binding Proteins AT3G56690 29.075 1.47e-10 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g02722 K13338 - gmx:100803882 1904.03