Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g02699 ATGGAAGGGAATGCGAAAAGCGAGCAAATCGTGGACGTAGGATCGGTCGTGGAAGCCGTTTCAGCTGATGACGGTGACGCTCCTCTCTATAGCCTCGAAAGTCTTTGCATGCGCTGTGGTGAAAACGGGATTACAAGATTTTTATTGACTTTAATTCCTCACTTCAGAAAGATTTTGTTATCAGCTTTTGAATGTCCACACTGTGGTGAAAGGAACAATGAAGTACAGTTTGCTGGTGAAATTCAACCACGTGGTTGCCGTTACACTTTGGCAATCCCATCAGGCAAGCAGAAGATGCTAAATCGTCAAGTGGTTAAATCAGAATCCGCTACCATTAAGATACCTGAACTGGATTTTGAGATTCCACCAGAGGCTCAGCGTGGTAGTCTGTCAACGGTGGAAGGGATACTGAGAGCAGCTGATGAACTTCAGGCCCTTCAAGAGGAACGCAAAAAAGTGGCTCCAGAGACAGCTGAAGCAATTGATCAGTTCTTGGTGAAACTGCAAGCCTGTGCAACAGGAGAATCAGCCATCACCTTTATTCTTGATGATCCTGCTGGAAACAGCTTCATCGAAAACCCGTTTGCACCGTCATCTGATCCGTCATCGACGATCAAGTTTTATGAGAGAACTCCTGAGCAGCAAGCATCATTGGGATATCTTGTTGACTCCACACAGATTGAAGGAACTCATGTTGACGCTCAGAGTAACAGTGCAGAAATGGCTGAAGCCTTGTTTCGATATACTGCACCAGAAGAGGTGATGACTTTCCCATCTACTTGTGGTGCCTGTGCTGCTAAGTGTGAGACTCGAATGTTTGTCACCAATATTCCTTACTTTCAAGAAGTAATTGTTATGGCATCCACATGTGATGTCTGTGGCTACCGCAACTCTGAGTTGAAACCTGGTGGACGAATTCCTGAAAAGGGAAAAACAATTACTCTTTCTGTGAAGAATGTCAATGACCTTAGCCGTGATGTAATAAAGTCTGATACTGCAAGTGTAAAAGTTCCGGAACTTGACTTGGAGCTGGCAAGCGGAACCCTTGGAGGAATAGTTACCACTGTTGAAGGTTTAATCACAAGAATTGGTGACAGCCTTGAGAGGGTCCATGGCTTTACTTTTGGAGATAGTCTTGATGAAAATAGTAGAAGCAAGTGGATAGACTTTAAAACAAGACTAAACAAGCTTCTTAGCTTGGAAGAAGCTTGGACTCTAATTCTTGATGATGCATTAGCCAATTCTTTTATAGCACCTGCAACTGATGACCTGAAAGAGGACAAACAATTAGCATTTGAGGAATACGAGAGGTCATGGGAACAAAACGAAGAATTAGGTCTGAATGATATGGACACCTCTTCTGCCGAAGTTGGTTCTGCACCAACCAATACTTCTAAAACTGACTGA 1407 0.4364 MEGNAKSEQIVDVGSVVEAVSADDGDAPLYSLESLCMRCGENGITRFLLTLIPHFRKILLSAFECPHCGERNNEVQFAGEIQPRGCRYTLAIPSGKQKMLNRQVVKSESATIKIPELDFEIPPEAQRGSLSTVEGILXRAADELQALQEERKKVAPETAEAIDQFLVKLQACATGESAITFILDDPAGNSFIENPFAPSSDPSSTIKFYERTPEQQASLGYLVDSTQIEGTHVDAQSNSAEMAEALFRYTAPEEVMTFPSTCGACAAKCETRMFVTNIPYFQEVIVMASTCDVCGYRNSELKPGGRIPEKGKTITLSVKNVNDLSRDVIKSDTASVKVPELDLELASGTLGGIVTTVEGLITRIGDSLERVHGFTFGDSLDENSRSKWIDFKTRLNKLLSLEEAWTLILDDALANSFIAPATDDLKEDKQLAFEEYERSWEQNEELGLNDMDTSSAEVGSAPTNTSKTD 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g02699 469 Gene3D ZPR1, A/B domain 306 448 IPR042451 -
Viun3g02699 469 Gene3D ZPR1, A/B domain 80 221 IPR042451 -
Viun3g02699 469 PANTHER ZINC FINGER PROTEIN ZPR1 14 458 IPR040141 -
Viun3g02699 469 MobiDBLite consensus disorder prediction 446 469 - -
Viun3g02699 469 Gene3D ZPR1, zinc finger domain 26 79 IPR042452 -
Viun3g02699 469 Gene3D ZPR1, zinc finger domain 250 305 IPR042452 -
Viun3g02699 469 FunFam Zinc finger protein ZPR1 251 305 - -
Viun3g02699 469 FunFam Zinc finger protein ZPR1 24 79 - -
Viun3g02699 469 Pfam ZPR1 zinc-finger domain 34 193 IPR004457 GO:0008270
Viun3g02699 469 Pfam ZPR1 zinc-finger domain 260 418 IPR004457 GO:0008270
Viun3g02699 469 Coils Coil 130 137 - -
Viun3g02699 469 MobiDBLite consensus disorder prediction 442 469 - -
Viun3g02699 469 NCBIfam ZPR1 zinc finger domain 36 218 IPR004457 GO:0008270
Viun3g02699 469 NCBIfam ZPR1 zinc finger domain 261 452 IPR004457 GO:0008270
Viun3g02699 469 FunFam Zinc finger protein ZPR1 306 448 - -
Viun3g02699 469 Coils Coil 139 150 - -
Viun3g02699 469 SMART zpr1 260 420 IPR004457 GO:0008270
Viun3g02699 469 SMART zpr1 34 194 IPR004457 GO:0008270
Viun3g02699 469 FunFam zinc finger protein ZPR1 80 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g02699 Viun-Chr3 28214043 28223822 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g02699 6 467 C2H2 Transcription Factor Family AT5G22480 72.336 0.0 720