Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g02682 ATGGCCATGTTGCAGACATGGAAAGCTGCTCTCACTCAAGTGGCAGACATAGTTGGGTGGGAATCAAAGAATTTTAGGACGGAGAGTGAACTCATTGAGGAAATTGTCAAAGATGTTATGCAAAAACTAAACCATATGTATCCAGCTGAAGTAAAAGAAACACTTGTTGGAATTGATCAAAATCTTGCTCCTATTGAATCATTATTGAGACTAAGGTCAAAAGAAGTTCGCATAATTGGAATTTGGGGAATGGGTGGATTAGGTAAGACAACCATTGCGAGCGCTTTATTTGCCAAATTATCATCTCAGTTTGAAGCTAGTTGCTTCTTGGCAAATGTAATGCTAGAACATGAAAAGAAAGGACTTGATTATTTGCGCAATAAACTTCTTTCTGAGATATTAGAAGATGTGAATCCCCATATAAGCACTTCCAAAGTGAGATCTACGTTTGTTATGAAGAGGCTTAGACAGAAAAAGGTTTTGATAGTGCTTGATGATGTGGACGATTCAAAGAAACTCGAAGATCTTGTTGCACAACATGATTGCTTGGGATCTGGGAGTAGGGTCATTGTCACTACAAGAGACAAGCATGTCCTTAGCAAAGGGGTAGATGCAATCTATGAGGTTAAGGGATTGTCCCTTGATCAATCTGTTAGGCTTTTTAGTTTAAATGCCTTCGGGAAAACTTATCCTGAAAGGGGCTTTGAAATGCTGTCTAAACAAGCGGTTGATCATGCAAATGGAAATCCATTGGCTTTAAAAGTTTTAGGTTCAGTTCTCCATTCCAGAAATGAGCAGCAATGGGACAATGCTCTGAGAAAATTCAAGAAGGTTCCCAATGCTGAAATTCAGAATGTCTTGAGATGGAGTTATGATGGATTAGATTATGAACAAAAAAACATGTTCCTGGACATTGCATGCTTTTTCAGAGGAGAAAATAAAGAAAATGTTATAAGGTTGCTCGAATTTTGTGGTTTCTATGCATATATTGGTATAAAAATCCTTCTAGAAAAAGGTCTTATAACTTTTTCTGATAATGGTGACGTCTGTATGCATGAATTGATACAGGAAATGGGTTGGGAAATTGTTCATCAGGAGTCTATCAAAGATCCTGGAAGGCGTAGCCGATTGTGGGATCTTAAAGAAATCTATGATGTGTTGAAAAATAACAGGGGAACTGAAGCAGTTGAAGGCATAATCTTAGATGTGTCTCAAATAAGAGTCCTGCTGCTGAGCTATGAGACTTTCTCAAGGATGATAAATATGAGATTTCTCAAATTCTATATGGGGAAGAGTAGGAAATGCAATTTGCACCTTCCTTCAGGTCTTGAATCCTTGCCTAATAAATTAATGTACCTACAATGGGATGGATACCCTTCCAAGTCTCTGCCATCAACTTTTTGTCCTGACAACCTTGTTGTGCTTTCAATGATGGAAAGCTACGTTGAGAAACTTTGGGATGGAATCAAGTGTCTTCCAAGCTTGAAGGAGATGAACCTCCATGCCTGCAAAAATTTAACTAATCTCCCAGATTTATCTCAGGCACCAAATCTTGAAACTATAGATGTTTCTAATTGCACAAGTCTGCTTCATGTTCCCTTATCCATCCAATATGTCAAGAAGCTTCTTCTGTTTAACTTGGAATCCTGCAAGAGTCTCAAGAGTCTTCCAAGAAACATTCACTTAACTTCTCTTGATATGTTCATTCTCAGACGCTGTTCTAGTCTTGATGAGTTTTCATTGACTTCGGAGAACATGACACGCCTGGACTTGAGAGAAACAAAAATAGCAGATTTCCCAGAGACTGTTTGGCAGCATCTGAACAAGCTTGTTTACTTGAATCTGGAATCCTGCAACAAACTCAAGAGCCTTACAAGCAAGATTCACTTCAAATCTCTTCAAAGACTCAATCTGAGAGATTGTTCAATTCTTGAAGAGTTTTCTGTGACTTCGGAGAGCATGGAATACTTGAATTTGAGAGGCACATCAATAAGAGAATTGCCAACATCAGTTTGGCGCAATAACAAGCTTTATACTTTGGTTCTTCATTCCTGTAAAAAACTGGTGAGTTTTCCTGAAAGACCAAAACTTGAGGATTCATCTCTTGTATCCTTCTCTGAAAGGCCAAATATGCATGAACTATGGACTTTGTCATCCTTAGCAGATTTATCACTAAAGGGAAGCACTATTGAGAATTTACCTGCAAGCATCAAAGATCTTCCTAGTCTAAAAAAACTTACCTTGACTGAGTGCAAGAAGCTACAGTCCTTACCAAGCCTTCCACCATCTTTGGAAGACTTATCCTTAGATGAAAGTAATATTGTGTGCTTACCTGATCTTCCACCATCTTTGAAAGCTCCATTACTCAGTGAAAGTAAAGTCGATCCACATCTTGTGAGCATGAAGGGTCTTTCTCAACTACAGATGTTTCCTCAGGTTAAGTGGAAAATGTTTCATTCTCTACCAGAGCTTCCACCATTCTTGGAAGAATTTTCACTAAGTGAAAGCAATATTAAGTTCCTGCCTGAAAGCATTAAAAATCTGTCACATATGAGGAAACTAGCCTTCACAAAGTGCACGAGGCTGCAGTATTTACCAGAGCTTCCGCCAAATTTGGAAGATTTGTTTGTAAGTGGATGTGACATTGAAAGCTTGCCGATAAGCATCAGAGATCTGGTTCACTTGCGAAAGATCACCTTAATTGAGTGCAAGAAGCTCAAGGCTCTACCAGAGCTCCCACAATGCCTGCAATCATTGTGTGCAGCTGACTGCAGATCACTTAAGATTGTTCAAAGTACAAAGAATATCTTAATAGAAGATAGGTATACATTCTATTGGAATTGCATAAACTTAGACCAAAAGTCACGCAACAACATCATTGCAGATGCACCCTTTGAAGCAGCTTTTACTTCTTTGAAAGAAAGAATACCTCTTGGACCTCTTATTTCTATTTGTTTGCCAGGAACTGAAATCCCAGACTGGTTCAGCCACCAATCAACAAATTCTTCACTGGACATGGAAATTCCTCTAGAGTGGTTCCTTGACTCGATGTTCTTAGGTTTTGCTCTGTGCCTTGTAATTGGTGGTTTCCAACAGAACAGTTATGAAGGGTATGATCCAGATATCAATTGTTATCACTTTGTAAAATCTGCCTCCTACTCTGGCCCCAGTGATCCCTTTCTTGGACATTGCACAACTGTAATGCAGGTCCCTAGAGGTTTTAATTCAGATCATATATTTATATGCTACTATCCCACTTTTAATGCCTCCATATTACAAGATTTCAAGGATTTAAGCTTGTACTATGATGCCAATAACTTAAAACTCAGAGTAATCTTTAAATTCAAGGGTCCATCTCAACGGTTGGACATTGTTAAGAAGTGCGGGGTCAGACCTCTTTTGATCGCAAATACTGAAAGGCATCACATAGAAAGTGAATTGCAACCTGAATAG 3453 0.3872 MAMLQTWKAALTQVADIVGWESKNFRTESELIEEIVKDVMQKLNHMYPAEVKETLVGIDQNLAPIESLLRLRSKEVRIIGIWGMGGLGKTTIASALFAKLSSQFEASCFLANVMLEHEKKGLDYLRNKLLSEILEDVNPHISTSKVRSTFVMKRLRQKKVLIVLDDVDDSKKLEDLVAQHDCLGSGSRVIVTTRDKHVLSKGVDAIYEVKGLSLDQSVRLFSLNAFGKTYPERGFEMLSKQAVDHANGNPLALKVLGSVLHSRNEQQWDNALRKFKKVPNAEIQNVLRWSYDGLDYEQKNMFLDIACFFRGENKENVIRLLEFCGFYAYIGIKILLEKGLITFSDNGDVCMHELIQEMGWEIVHQESIKDPGRRSRLWDLKEIYDVLKNNRGTEAVEGIILDVSQIRVLLLSYETFSRMINMRFLKFYMGKSRKCNLHLPSGLESLPNKLMYLQWDGYPSKSLPSTFCPDNLVVLSMMESYVEKLWDGIKCLPSLKEMNLHACKNLTNLPDLSQAPNLETIDVSNCTSLLHVPLSIQYVKKLLLFNLESCKSLKSLPRNIHLTSLDMFILRRCSSLDEFSLTSENMTRLDLRETKIADFPETVWQHLNKLVYLNLESCNKLKSLTSKIHFKSLQRLNLRDCSILEEFSVTSESMEYLNLRGTSIRELPTSVWRNNKLYTLVLHSCKKLVSFPERPKLEDSSLVSFSERPNMHELWTLSSLADLSLKGSTIENLPASIKDLPSLKKLTLTECKKLQSLPSLPPSLEDLSLDESNIVCLPDLPPSLKAPLLSESKVDPHLVSMKGLSQLQMFPQVKWKMFHSLPELPPFLEEFSLSESNIKFLPESIKNLSHMRKLAFTKCTRLQYLPELPPNLEDLFVSGCDIESLPISIRDLVHLRKITLIECKKLKALPELPQCLQSLCAADCRSLKIVQSTKNILIEDRYTFYWNCINLDQKSRNNIIADAPFEAAFTSLKERIPLGPLISICLPGTEIPDWFSHQSTNSSLDMEIPLEWFLDSMFLGFALCLVIGGFQQNSYEGYDPDINCYHFVKSASYSGPSDPFLGHCTTVMQVPRGFNSDHIFICYYPTFNASILQDFKDLSLYYDANNLKLRVIFKFKGPSQRLDIVKKCGVRPLLIANTERHHIESELQPE 1150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g02682 1150 Gene3D Ribonuclease Inhibitor 384 582 IPR032675 -
Viun3g02682 1150 Gene3D Ribonuclease Inhibitor 707 794 IPR032675 -
Viun3g02682 1150 SUPERFAMILY L domain-like 371 692 - -
Viun3g02682 1150 FunFam Disease resistance protein RPS4 393 584 - -
Viun3g02682 1150 Gene3D - 44 206 IPR027417 -
Viun3g02682 1150 Gene3D - 212 295 IPR042197 -
Viun3g02682 1150 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 7 581 IPR044974 GO:0006952
Viun3g02682 1150 SUPERFAMILY L domain-like 654 973 - -
Viun3g02682 1150 Pfam C-JID domain 986 1131 IPR045344 -
Viun3g02682 1150 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 38 305 IPR027417 -
Viun3g02682 1150 PRINTS Disease resistance protein signature 78 93 - -
Viun3g02682 1150 PRINTS Disease resistance protein signature 738 754 - -
Viun3g02682 1150 PRINTS Disease resistance protein signature 246 260 - -
Viun3g02682 1150 PRINTS Disease resistance protein signature 154 168 - -
Viun3g02682 1150 Pfam NB-ARC domain 68 281 IPR002182 GO:0043531
Viun3g02682 1150 SUPERFAMILY "Winged helix" DNA-binding domain 282 388 IPR036390 -
Viun3g02682 1150 Gene3D Ribonuclease Inhibitor 800 936 IPR032675 -
Viun3g02682 1150 Gene3D - 1 43 IPR035897 -
Viun3g02682 1150 Gene3D Ribonuclease Inhibitor 583 706 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g02682 Viun-Chr3 27830758 27835748 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g02682 844 910 WRKY Transcription Factor Family AT4G12020 35.821 2.85e-06 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g02682 - - gmx:100797269 1870.13