Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g02641 ATGTCTGATTCTTATGCTAGTACCTTTCACTCTCCCACTCCAAACAACACCCATGCAACCCCCAAAATCACCTCATTATGCTCAATAGCTCAACCTTACTGTATTTGCACTCACTGTAACCACATCCTCTCCTTCAACCACCATGTTGGTAATGCAGCAGAGGAAGGGACAAATAACACAGGGTCCCATGTTCAGTCCCAGCAAAGCACAAGGTGGAGTCCAACACCAGTTCAGTTACTGGTCCTTGAGGAATTGTATAGGCAAGGAACTAAAACACCATCAGCTGAACAGATTCAACAAATAGCTTCACAGTTGCGGCAGTTTGGGAAGATTGAAGGGAAGAACGTGTTCTACTGGTTCCAGAATCACAAGGCGAGAGAGAGACAGAAGAGGCGCCGCAGGGAGATGGAGGAAAACAATGCTGCTTCTTCTAGCGAAGGTTTGAAAGAGACAGGTTGTGGAGTTAAAGAGACAAAGAAGTGGGCATCCACTTCAAACTGCAGTCGACATGCAGAGGAATCTGCTGCACCGGATACAGCAGAAAAGGGCTCTAATGGGTGGACTCAGTTTGAAGAGAGAGGCATACAAGTTTTGAGGAGAAACATATCAGAAAGAAGGTTGCAATTGCAAGATAACATGGAAATGCCTTGTTTCCCTCCCACTACTATGGCAGCTCTCGCAACCTCACACAGAACACTTAACACACAACTTTTAATCCCTCAAAGTTATAACAGAGAAAGTTTAAACTACTATGATGCAGAAAATGCAGATCCTCGAACCCTCGACCTATTTCCACACAAGAGTGATGACCAAGATGGCATTTGTCTTGCTGAGAGGAAATCCATGTTCTGTGCCAGTGCTTCTATGGACACTGATATCACCTCCACCCAGTTTTTTGAGTTTCTTCCTTTAAGAAACTGA 921 0.4473 MSDSYASTFHSPTPNNTHATPKITSLCSIAQPYCICTHCNHILSFNHHVGNAAEEGTNNTGSHVQSQQSTRWSPTPVQLLVLEELYRQGTKTPSAEQIQQIASQLRQFGKIEGKNVFYWFQNHKARERQKRRRREMEENNAASSSEGLKETGCGVKETKKWASTSNCSRHAEESAAPDTAEKGSNGWTQFEERGIQVLRRNISERRLQLQDNMEMPCFPPTTMAALATSHRTLNTQLLIPQSYNRESLNYYDAENADPRTLDLFPHKSDDQDGICLAERKSMFCASASMDTDITSTQFFEFLPLRN 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g02641 306 MobiDBLite consensus disorder prediction 158 172 - -
Viun3g02641 306 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 53 300 IPR044555 GO:0003700|GO:0099402
Viun3g02641 306 SMART HOX_1 67 134 IPR001356 GO:0003677
Viun3g02641 306 Pfam Homeodomain 69 129 IPR001356 GO:0003677
Viun3g02641 306 MobiDBLite consensus disorder prediction 127 188 - -
Viun3g02641 306 ProSiteProfiles 'Homeobox' domain profile. 65 130 IPR001356 GO:0003677
Viun3g02641 306 SUPERFAMILY Homeodomain-like 63 133 IPR009057 -
Viun3g02641 306 Coils Coil 126 146 - -
Viun3g02641 306 Gene3D - 53 144 - -
Viun3g02641 306 MobiDBLite consensus disorder prediction 54 73 - -
Viun3g02641 306 CDD homeodomain 70 125 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g02641 Viun-Chr3 27112350 27114788 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g02641 58 306 Wox Gene Family AT3G18010 33.115 2.05e-36 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Viun3g02641 Homeodomain 3.7e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g02641 - - vum:124827065 483.796