Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g02636 ATGGACCCTAATGAAGTGCAGCATTCTCATTGCCTAGAGATGACCATGGAACTGCACCAGGTTGTTCCACCACCCCACAAGACCACTCTCACCAAACTCAAAACCAGGCTCAAGGAAACCTTTTTCCCTGATGACCCTCTTCGTCAATTCAAGGGTCAACCACTCAAGACAAAGCTCATTCTTGCAGCTCAATATCTCTTCCCTATTCTTCAATGGGGTCCTAAGTACACCTTCAAACTCTTCAAATCTGATCTTGTTGCTGGCCTCACTATTGCTAGCTTGGCCATCCCTCAGGGAATCAGTTATGCTAAGCTTGCAAATCTTCCTCCGATCGTGGGACTTTATTCCAGCTTTGTTCCGCCGCTTGTTTATGCTGTTCTTGGGAGCTCGAGGGACCTAGCTGTAGGACCTGTGTCGATTGCTTCTCTGGTGCTGGGATCGATGCTGAGACAGGAAGTGTCTCCCACAGCAGACCCGGTTCTGTTCCTTCAACTAGCTTTCACTTCAACGTTTTTTGCTGGTCTCTTTCAAGCCTCACTTGGGATCCTAAGACTCGGTTTCATAATTGATTTTCTGTCCAAGGCCATTCTGATTGGGTTCATGGCTGGAGCTGCTATTATTGTCTCCCTGCAACAGCTTAAGAGTCTGCTCGGAATCTCACATTTCACTAATCAGATGGGCCTGATTCCTGTGATGACTTCTGTTTTCCATAATATACACGAGTGGTCATGGCAAACGATACTGATGGGGATTTGCTTTCTAGTGCTACTACTATTAGCAAGACACGTTAGCATAAAAAAGCCAAAGTTATTTTGGGTCTCAGCTGGAGCTCCTCTTTTGTGTGTTATCATTTCCACACTTGTAGTTTTTGCAATAAAGGCTCAAAATCATGGCATTAGTGTGATTGGAAAATTGCAACAAGGGATAAATCCTCCTTCATGGAACATGCTGCGCTTTCATGGAAGTCACTTAGGCCTAGTCATGAAAACAGGGCTTATCACTGGCATTTTGTCTCTCACTGAAGGTATTGCAGTGGGAAGAACATTTGCAGCTTTGAAAAACTACAAAGTGGATGGAAACAAGGAAATGATGGCAATTGGGTTTATGAATGTGGTTGGCTCCTCCACTTCCTGTTACGTTACAACAGGTGCTTTCTCTCGGTCAGCTGTTAACAACAACGCAGGTGCAAAAACAGCTGTGTCAAATGTAGTGATGTCTGTCACAGTCATGGTGACACTCCTTTTTCTGATGCCATTGTTCCAATACACACCCAATGTTGTGTTGGGTGCGATCATAGTCACTGCAGTGATTGGCCTCATTGATCTCCCTGCTGCTTACAACATTTGGAAGATCGACAAATTCGATTTCCTTGTCATGTTAACTGCGTTCATGGGTGTTCTTTTCATCTCTGTCCAAGGAGGCCTTGCTCTTGCTGTTGGGTTATCAACTTTCAAGATATTGATGCAAATAACAAGGCCGAAAACAGTGATGTTGGGAAAGATTCCAGGAACAGACATATACAGAAATCTTCATCAGTACAAGGAAGCTGTGCGAGTACCTGGTTTTCTTATTTTAAGCATTGAGGCTCCCATCAATTTTGCTAACATAACATATCTTAACGAGAGAACACTGCGCTGGGTGGAAGAAGAGGAAGACAACATAAAAGAACAATCAAGCCTTCGATTCTTGATATTGGAAATGTCTGCTGTGAGTGCCATTGATACAAGTGGAATCTCACTTTTCAAAGAGTTGAAAGCAACCTTGGAAAAGAAGGGTGTTGAGCTTGTGTTGGTGAATCCTCTGGCTGAGGTCATTGAGAAGCTGAAAAAAGTTGATGAAGCTTCTGATTTCATGCAAGCAGATAACCTTTTCTTGACTGTTGGAGAGGCTGTGGCTTCACTTTCACCAACAATGAAGGGTCAATCACCAACTTTTCTTGGAGGGGCACACACAATTGTGTAA 1962 0.4378 MDPNEVQHSHCLEMTMELHQVVPPPHKTTLTKLKTRLKETFFPDDPLRQFKGQPLKTKLILAAQYLFPILQWGPKYTFKLFKSDLVAGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLVYAVLGSSRDLAVGPVSIASLVLGSMLRQEVSPTADPVLFLQLAFTSTFFAGLFQASLGILRLGFIIDFLSKAILIGFMAGAAIIVSLQQLKSLLGISHFTNQMGLIPVMTSVFHNIHEWSWQTILMGICFLVLLLLARHVSIKKPKLFWVSAGAPLLCVIISTLVVFAIKAQNHGISVIGKLQQGINPPSWNMLRFHGSHLGLVMKTGLITGILSLTEGIAVGRTFAALKNYKVDGNKEMMAIGFMNVVGSSTSCYVTTGAFSRSAVNNNAGAKTAVSNVVMSVTVMVTLLFLMPLFQYTPNVVLGAIIVTAVIGLIDLPAAYNIWKIDKFDFLVMLTAFMGVLFISVQGGLALAVGLSTFKILMQITRPKTVMLGKIPGTDIYRNLHQYKEAVRVPGFLILSIEAPINFANITYLNERTLRWVEEEEDNIKEQSSLRFLILEMSAVSAIDTSGISLFKELKATLEKKGVELVLVNPLAEVIEKLKKVDEASDFMQADNLFLTVGEAVASLSPTMKGQSPTFLGGAHTIV 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g02636 653 CDD STAS_SulP_like_sulfate_transporter 513 627 - -
Viun3g02636 653 ProSiteProfiles STAS domain profile. 512 634 IPR002645 -
Viun3g02636 653 ProSitePatterns SLC26A transporters signature. 110 131 IPR018045 GO:0008271|GO:0008272
Viun3g02636 653 Pfam Sulfate permease family 81 461 IPR011547 GO:0016020
Viun3g02636 653 PANTHER SULFATE TRANSPORTER 30 635 IPR001902 GO:0016020|GO:0055085
Viun3g02636 653 Pfam STAS domain 513 630 IPR002645 -
Viun3g02636 653 FunFam Sulfate transporter 31 492 637 - -
Viun3g02636 653 NCBIfam sulfate permease 68 630 IPR001902 GO:0016020|GO:0055085
Viun3g02636 653 Gene3D STAS domain 492 635 IPR036513 -
Viun3g02636 653 SUPERFAMILY SpoIIaa-like 518 634 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g02636 Viun-Chr3 27010262 27018437 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g02636 13 641 Inorganic Solute Cotransporters AT3G15990 66.244 0.0 854
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g02636 K17471 - gmx:100787284 1133.63