Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g02632 ATGGCCTTGTTACTGTTGGCATTGGTGGTCCAAGTGGATCTGGTAAAACAAGCAGAAAAGGTGGCATCTGTTATTGGTTGTACCGTTATTTCAATGGGGAATTACCGTCATGGGGTTGATGAAGGGAATGATGTGGATTCTATAGATTTTGATACGCTGATCAAGAATCTTGAGGATTTGACTAAAGGCAAGGATACATTAATCCCAAAGTTTGACTATCAGCAAAAGAAGCGTGTTGGCTATAAAGCAATAAAGAGCGCTTCATCTGGGGTAATAGTTGACGGCACATATGCATTGCATGCAAAACTGCGGTCTTTACTGGACATTCGAGTTGCTGTGGTTGGTGGTGTACATTTTAGCTTGCTTTCTAAAGTTCGCTACGACATTGGAGATTCTTGTTCACTGGATTACCTTATAGATAGCATTTTTCCACTGTTTAGGAAACACATTGAGCCAGATCTTCATCATGCACAGATCAGAATTAATAACAGCTTTGTCTCATCATTCAGAGAGGCAATCTACAAGGTCAAATGCAGAAGTGAGTCTACAGATGGACATTCAGGTTCCGCTTTTCAAGGAAATGAAGCCCAAACAGACAATTTTATTGAAATGTACCTTAGACCGCCTTCATCTAGTGAAGAAGCAAGGATAAATGATTGGATCAAAGTGCGGCAGTCTGGAATTAGATATTATCTATCACTTGGTGACCAGAGGATTGTCGACAAGAATTTCATTATCAGGCCTAAAGCTGAATTTGAGGTTGGTCGAATGACATTGGGTGGGCTGTTGGCTCTTGGGTATACTGTTGTGGTTAGTTATAAGCGTGCATCGACAACTGTCAATAATGGCAAGGTTACCATCTCTTTTGAGACCATTGATGTTCTTGGTGAGACATTTATGGTGATGAGAGGAACTAATAGAAAGACTGTTGGAACGGAAGCATCAAGGATGGGTATTGATGGACCTTGGATTACCAAATCATATCTGGAAATGATTCTGGAGAGAAAAGGTGTACCTCGTCTTAGTACTCCACCACTTGTGTCTAATACTACTGTGGCTGGTAGTCAAGAAACAGCGATCATTGCCCCAAAGCCAATCCGCGTTACTCCTAATGTTGTTACTGGGCTTGAGGATTTACCCCAGCCATGGACTCGATCCCCAACAAAATCTAAAATGGAACCTGTTGTGGCTGCATGGCAGTTCATATCTTCAGATTCCTCCCAGCCTGACAATTCAGTCCTAGATCCTTCATCTTTCAGGGATAGTATTAGGCTTGCTCCAATGCCTGATTCATTTGACTTGGACAGGGGATTGCTTTTGGCTGTTCAAGCAATACAAGCATTGTTGGAGAATAAAGGTTTCCCAGTCATAGTTGGAATTGGAGGTCCAAGTGGGTCTGGGAAGACTAGTTTGGCTCATAAAATGGCAAATATAATTGGTTGTGAAGTAGTTTCCCTGGAAAGCTATTATAAACAAGTAAAGGATTTTAAATATGATGACTTCAACGCACTTGATTTATCTTTGCTATCTAAGAACATTGATGACATAAGAAATGGCCAAAGAACAAAAGTACCTATATTTGATTTGGAAAGTGGTGCTCGGAATGGTTTCAAGGAGCTTGAGGTTTCTGAAGATTGTGGAGTGATTATATTTGAAGGCGTCTTTGCTTTGCATCCTGATATCCGAATATCGCTTGACTTGTGGATTGCTGTTGTTGGAGGTGTTCATTCACATTTGATTTCCCGAGTTCAAAGGGATAAGAGTAGAGTGGGATGCTTTATTTCTCAAAATGAGATCATGATGACAGTGTTTCCCATGTTCCAGCAGCTTATCGAACCTCATCTTGTTCATGCACATCTTAAAATTCGAAATGATTTTGACCCTGTGCTTTCTCCTGAGAGTTCATTATTTGTATTAAAGAGTAACAAAAAAGTAGCATATCAAGATATTGTTGCAATTCTTGATTCAGCAAAATTTTGCAGTTCGGTGCAGAAATTTATTGACATCTATATTAGGCTTCCTGGGATCCCTTCTAATGGACAGTTGAGAGACAGTGACTGTATTCGAGTCAGAATATGTGAAGGCAGATTTGCGTTGCTGATACGAGAGCCCATCAAAGAAGGGAACTTTATCATTCAGCCCAAAGTGGATTTTGATATTAGCATTAGTACGGTTGCTGGCCTTCTTAATCTTGGGTATCAAGCAGTTGCTTATATTGAAGCGTCTGCATTCATCTATCAGGATGGAAAGATTTTAATTGAGGTTGATCACCTTCAAGATGTACCTGGGCCATACATTCAGATAAAGGGTGTTAATAAAGATGCAGTAGCCGCAGCTGGTTCAATGCTTAAATTGGATAATTCATATACGACCAAGAGTTACCTTGAAATAATTTTGGAAAGACTACCGGGGATTGAAAGAACTTCTGGTGGGATTCATTCTCAACAACCAGCAAGGCTGCTAGAGATTGTTGAATTTATTCAATCTCAGGGCAGTAGCTCTGCTTCAGAATCCTCATCAGGTAGAGTAGTCTCTCCAATTGAAGGGGTTATTGAGGAGATGCAATCAAGGATTAGAAGGCTTGAAAAGTGGCTAGCGATAAATACGGTCCTATGGACAGTTCTGATGTCTGCCCTTGTTGGTTATTCACTGTATCAAAGAAGGAAGGCATAA 2673 0.4052 MALLLLALVVQVDLVKQAEKVASVIGCTVISMGNYRHGVDEGNDVDSIDFDTLIKNLEDLTKGKDTLIPKFDYQQKKRVGYKAIKSASSGVIVDGTYALHAKLRSLLDIRVAVVGGVHFSLLSKVRYDIGDSCSLDYLIDSIFPLFRKHIEPDLHHAQIRINNSFVSSFREAIYKVKCRSESTDGHSGSAFQGNEAQTDNFIEMYLRPPSSSEEARINDWIKVRQSGIRYYLSLGDQRIVDKNFIIRPKAEFEVGRMTLGGLLALGYTVVVSYKRASTTVNNGKVTISFETIDVLGETFMVMRGTNRKTVGTEASRMGIDGPWITKSYLEMILERKGVPRLSTPPLVSNTTVAGSQETAIIAPKPIRVTPNVVTGLEDLPQPWTRSPTKSKMEPVVAAWQFISSDSSQPDNSVLDPSSFRDSIRLAPMPDSFDLDRGLLLAVQAIQALLENKGFPVIVGIGGPSGSGKTSLAHKMANIIGCEVVSLESYYKQVKDFKYDDFNALDLSLLSKNIDDIRNGQRTKVPIFDLESGARNGFKELEVSEDCGVIIFEGVFALHPDIRISLDLWIAVVGGVHSHLISRVQRDKSRVGCFISQNEIMMTVFPMFQQLIEPHLVHAHLKIRNDFDPVLSPESSLFVLKSNKKVAYQDIVAILDSAKFCSSVQKFIDIYIRLPGIPSNGQLRDSDCIRVRICEGRFALLIREPIKEGNFIIQPKVDFDISISTVAGLLNLGYQAVAYIEASAFIYQDGKILIEVDHLQDVPGPYIQIKGVNKDAVAAAGSMLKLDNSYTTKSYLEIILERLPGIERTSGGIHSQQPARLLEIVEFIQSQGSSSASESSSGRVVSPIEGVIEEMQSRIRRLEKWLAINTVLWTVLMSALVGYSLYQRRKA 890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g02632 890 Gene3D - 14 181 IPR027417 -
Viun3g02632 890 PANTHER URIDINE KINASE 18 203 - -
Viun3g02632 890 SMART AAA_5 454 598 IPR003593 GO:0016887
Viun3g02632 890 CDD UMPK_like 22 164 - -
Viun3g02632 890 SUPERFAMILY CYTH-like phosphatases 650 797 IPR033469 -
Viun3g02632 890 Gene3D - 454 631 IPR027417 -
Viun3g02632 890 Gene3D - 642 802 - -
Viun3g02632 890 Pfam Phosphoribulokinase / Uridine kinase family 45 161 IPR006083 GO:0005524|GO:0016301
Viun3g02632 890 Pfam Phosphoribulokinase / Uridine kinase family 457 622 IPR006083 GO:0005524|GO:0016301
Viun3g02632 890 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 447 625 IPR027417 -
Viun3g02632 890 CDD UMPK_like 457 625 - -
Viun3g02632 890 PRINTS Uridine kinase signature 482 493 - -
Viun3g02632 890 PRINTS Uridine kinase signature 576 586 - -
Viun3g02632 890 PRINTS Uridine kinase signature 455 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g02632 Viun-Chr3 26932314 26950663 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g02632 450 613 PRT Gene Family AT1G55810 27.528 3.66e-11 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g02632 - - gmx:100778905 1598.95