Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g02631 ATGGCCTTGTTACTGTTGGCATTGGTGGTCCAAGTGGATCTGGTAAAACAAGCAGAAAAGGTGGCATCTGTTATTGGTTGTACCGTTATTTCAATGGGGAATTACCGTCATGGGGTTGATGAAGGGAATGATGTGGATTCTATAGATTTTGATACGCTGATCAAGAATCTTGAGGATTTGACTAAAGGCAAGGATACATTAATCCCAAAGTTTGACTATCAGCAAAAGAAGCGTGTTGGCTATAAAGCAATAAAGAGCGCTTCATCTGGGGTGGTAATAGTTGACGGCACATATGCATTGCATGCAAAACTGCGGTCTTTACTGGACATTCGAGTTGCTGTGGTTGGTGGTGTACATTTTAGCTTGCTTTCTAAAGTTCGCTACGACATTGGAGATTCTTGTTCACTGGATTACCTTATAGATAGCATTTTTCCACTGTTTAGGAAACACATTGAGCCAGATCTTCATCATGCACAGATCAGAATTAATAACAGCTTTGTCTCATCATTCAGAGAGGCAATCTACAAGGTCAAATGCAGAAGTGAGTCTACAGATGGACATTCAGGTTCCGCTTTTCAAGGAAATGAAGCCCAAACAGACAATTTTATTGAAATGTACCTTAGACCGCCTTCATCTAGTGAAGAAGCAAGGATAAATGATTGGATCAAAGTGCGGCAGTCTGGAATTAGATATTATCTATCACTTGGTGACCAGAGGATTGTCGACAAGAATTTCATTATCAGGCCTAAAGCTGAATTTGAGGTTGGTCGAATGACATTGGGTGGGCTGTTGGCTCTTGGGTATACTGTTGTGGTTAGTTATAAGCGTGCATCGACAACTGTCAATAATGGCAAGGTTACCATCTCTTTTGAGACCATTGATGTTCTTGGTGAGACATTTATGGTGATGAGAGGAACTAATAGAAAGACTGTTGGAACGGAAGCATCAAGGATGGGTATTGATGGACCTTGGATTACCAAATCATATCTGGAAATGATTCTGGAGAGAAAAGGTGTACCTCGTCTTAGTACTCCACCACTTGTGTCTAATACTACTGTGGCTGGTAGTCAAGAAACAGCGATCATTGCCCCAAAGCCAATCCGCGTTACTCCTAATGTTGTTACTGGGCTTGAGGATTTACCCCAGCCATGGACTCGATCCCCAACAAAATCTAAAATGGAACCTGTTGTGGCTGCATGGCAGTTCATATCTTCAGATTCCTCCCAGCCTGACAATTCAGTCCTAGATCCTTCATCTTTCAGGGATAGTATTAGGCTTGCTCCAATGCCTGATTCATTTGACTTGGACAGGGGATTGCTTTTGGCTGTTCAAGCAATACAAGCATTGTTGGAGAATAAAGGTTTCCCAGTCATAGTTGGAATTGGAGGTCCAAGTGGGTCTGGGAAGACTAGTTTGGCTCATAAAATGGCAAATATAATTGGTTGTGAAGTAGTTTCCCTGGAAAGCTATTATAAACAAGTAAAGGATTTTAAATATGATGACTTCAACGCACTTGATTTATCTTTGCTATCTAAGAACATTGATGACATAAGAAATGGCCAAAGAACAAAAGTACCTATATTTGATTTGGAAAGTGGTGCTCGGAATGGTTTCAAGGAGCTTGAGGTTTCTGAAGATTGTGGAGTGATTATATTTGAAGGCGTCTTTGCTTTGCATCCTGATATCCGAATATCGCTTGACTTGTGGATTGCTGTTGTTGGAGGTGTTCATTCACATTTGATTTCCCGAGTTCAAAGGGATAAGAGTAGAGTGGGATGCTTTATTTCTCAAAATGAGATCATGATGACAGTGTTTCCCATGTTCCAGCAGCTTATCGAACCTCATCTTGTTCATGCACATCTTAAAATTCGAAATGATTTTGACCCTGTGCTTTCTCCTGAGAGTTCATTATTTGTATTAAAGAGTAACAAAAAAGTAGCATATCAAGATATTGTTGCAATTCTTGATTCAGCAAAATTTTGCAGTTCGGTGCAGAAATTTATTGACATCTATATTAGGCTTCCTGGGATCCCTTCTAATGGACAGTTGAGAGACAGTGACTGTATTCGAGTCAGAATATGTGAAGGCAGATTTGCGTTGCTGATACGAGAGCCCATCAAAGAAGGGAACTTTATCATTCAGCCCAAAGTGGATTTTGATATTAGCATTAGTACGGTTGCTGGCCTTCTTAATCTTGGGTATCAAGCAGTTGCTTATATTGAAGCGTCTGCATTCATCTATCAGGATGGAAAGATTTTAATTGAGGTTGATCACCTTCAAGATGTACCTGGGCCATACATTCAGATAAAGGGTGTTAATAAAGATGCAGTAGCCGCAGCTGGTTCAATGCTTAAATTGGATAATTCATATACGACCAAGAGTTACCTTGAAATAATTTTGGAAAGACTACCGGGGATTGAAAGAACTTCTGGTGGGATTCATTCTCAACAACCAGCAAGGCTGCTAGAGATTGTTGAATTTATTCAATCTCAGGGCAGTAGCTCTGCTTCAGAATCCTCATCAGGTAGAGTAGTCTCTCCAATTGAAGGGGTTATTGAGGAGATGCAATCAAGGATTAGAAGGCTTGAAAAGTGGCTAGCGATAAATACGGTCCTATGGACAGTTCTGATGTCTGCCCTTGTTGGTTATTCACTGTATCAAAGAAGGAAGGCATAA 2676 0.4055 MALLLLALVVQVDLVKQAEKVASVIGCTVISMGNYRHGVDEGNDVDSIDFDTLIKNLEDLTKGKDTLIPKFDYQQKKRVGYKAIKSASSGVVIVDGTYALHAKLRSLLDIRVAVVGGVHFSLLSKVRYDIGDSCSLDYLIDSIFPLFRKHIEPDLHHAQIRINNSFVSSFREAIYKVKCRSESTDGHSGSAFQGNEAQTDNFIEMYLRPPSSSEEARINDWIKVRQSGIRYYLSLGDQRIVDKNFIIRPKAEFEVGRMTLGGLLALGYTVVVSYKRASTTVNNGKVTISFETIDVLGETFMVMRGTNRKTVGTEASRMGIDGPWITKSYLEMILERKGVPRLSTPPLVSNTTVAGSQETAIIAPKPIRVTPNVVTGLEDLPQPWTRSPTKSKMEPVVAAWQFISSDSSQPDNSVLDPSSFRDSIRLAPMPDSFDLDRGLLLAVQAIQALLENKGFPVIVGIGGPSGSGKTSLAHKMANIIGCEVVSLESYYKQVKDFKYDDFNALDLSLLSKNIDDIRNGQRTKVPIFDLESGARNGFKELEVSEDCGVIIFEGVFALHPDIRISLDLWIAVVGGVHSHLISRVQRDKSRVGCFISQNEIMMTVFPMFQQLIEPHLVHAHLKIRNDFDPVLSPESSLFVLKSNKKVAYQDIVAILDSAKFCSSVQKFIDIYIRLPGIPSNGQLRDSDCIRVRICEGRFALLIREPIKEGNFIIQPKVDFDISISTVAGLLNLGYQAVAYIEASAFIYQDGKILIEVDHLQDVPGPYIQIKGVNKDAVAAAGSMLKLDNSYTTKSYLEIILERLPGIERTSGGIHSQQPARLLEIVEFIQSQGSSSASESSSGRVVSPIEGVIEEMQSRIRRLEKWLAINTVLWTVLMSALVGYSLYQRRKA 891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g02631 891 Gene3D - 455 632 IPR027417 -
Viun3g02631 891 Pfam Phosphoribulokinase / Uridine kinase family 45 162 IPR006083 GO:0005524|GO:0016301
Viun3g02631 891 Pfam Phosphoribulokinase / Uridine kinase family 458 623 IPR006083 GO:0005524|GO:0016301
Viun3g02631 891 CDD UMPK_like 458 626 - -
Viun3g02631 891 CDD UMPK_like 22 165 - -
Viun3g02631 891 Gene3D - 643 803 - -
Viun3g02631 891 PRINTS Uridine kinase signature 456 473 - -
Viun3g02631 891 PRINTS Uridine kinase signature 483 494 - -
Viun3g02631 891 PRINTS Uridine kinase signature 577 587 - -
Viun3g02631 891 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 26 115 IPR027417 -
Viun3g02631 891 SUPERFAMILY CYTH-like phosphatases 651 798 IPR033469 -
Viun3g02631 891 SMART AAA_5 455 599 IPR003593 GO:0016887
Viun3g02631 891 PANTHER URIDINE KINASE 18 204 - -
Viun3g02631 891 Gene3D - 14 182 IPR027417 -
Viun3g02631 891 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 448 626 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g02631 Viun-Chr3 26932313 26950663 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g02631 451 614 PRT Gene Family AT1G55810 27.528 3.64e-11 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g02631 - - gmx:100778905 1605.11