Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g02630 ATGGATGATGAAGTTGTTCAGCGAGTGTTCCATGAAGGAGGACGCGATTACTTCCAACAACAGCCTTCGACTTCTTCGTCTTCCATCCTCCAATCTCTCCCTCTCCATGTGTCTTTTGATCATGGATGTTATTTGTTGGTAAAATCTATTCAAGAACTCCGAGAGAAAAAGGATGGCCTTGTTACTGTTGGCATTGGTGGTCCAAGTGGATCTGGTAAAACAAGCTTAGCAGAAAAGGTGGCATCTGTTATTGGTTGTACCGTTATTTCAATGGGGAATTACCGTCATGGGGTTGATGAAGGGAATGATGTGGATTCTATAGATTTTGATACGCTGATCAAGAATCTTGAGGATTTGACTAAAGGCAAGGATACATTAATCCCAAAGTTTGACTATCAGCAAAAGAAGCGTGTTGGCTATAAAGCAATAAAGAGCGCTTCATCTGGGGTAATAGTTGACGGCACATATGCATTGCATGCAAAACTGCGGTCTTTACTGGACATTCGAGTTGCTGTGGTTGGTGGTGTACATTTTAGCTTGCTTTCTAAAGTTCGCTACGACATTGGAGATTCTTGTTCACTGGATTACCTTATAGATAGCATTTTTCCACTGTTTAGGAAACACATTGAGCCAGATCTTCATCATGCACAGATCAGAATTAATAACAGCTTTGTCTCATCATTCAGAGAGGCAATCTACAAGGTCAAATGCAGAAGTGAGTCTACAGATGGACATTCAGGTTCCGCTTTTCAAGGAAATGAAGCCCAAACAGACAATTTTATTGAAATGTACCTTAGACCGCCTTCATCTAGTGAAGAAGCAAGGATAAATGATTGGATCAAAGTGCGGCAGTCTGGAATTAGATATTATCTATCACTTGGTGACCAGAGGATTGTCGACAAGAATTTCATTATCAGGCCTAAAGCTGAATTTGAGGTTGGTCGAATGACATTGGGTGGGCTGTTGGCTCTTGGGTATACTGTTGTGGTTAGTTATAAGCGTGCATCGACAACTGTCAATAATGGCAAGGTTACCATCTCTTTTGAGACCATTGATGTTCTTGGTGAGACATTTATGGTGATGAGAGGAACTAATAGAAAGACTGTTGGAACGGAAGCATCAAGGATGGGTATTGATGGACCTTGGATTACCAAATCATATCTGGAAATGATTCTGGAGAGAAAAGGTGTACCTCGTCTTAGTACTCCACCACTTGTGTCTAATACTACTGTGGCTGGTAGTCAAGAAACAGCGATCATTGCCCCAAAGCCAATCCGCGTTACTCCTAATGTTGTTACTGGGCTTGAGGATTTACCCCAGCCATGGACTCGATCCCCAACAAAATCTAAAATGGAACCTGTTGTGGCTGCATGGCAGTTCATATCTTCAGATTCCTCCCAGCCTGACAATTCAGTCCTAGATCCTTCATCTTTCAGGGATAGTATTAGGCTTGCTCCAATGCCTGATTCATTTGACTTGGACAGGGGATTGCTTTTGGCTGTTCAAGCAATACAAGCATTGTTGGAGAATAAAGGTTTCCCAGTCATAGTTGGAATTGGAGGTCCAAGTGGGTCTGGGAAGACTAGTTTGGCTCATAAAATGGCAAATATAATTGGTTGTGAAGTAGTTTCCCTGGAAAGCTATTATAAACAAGTAAAGGATTTTAAATATGATGACTTCAACGCACTTGATTTATCTTTGCTATCTAAGAACATTGATGACATAAGAAATGGCCAAAGAACAAAAGTACCTATATTTGATTTGGAAAGTGGTGCTCGGAATGGTTTCAAGGAGCTTGAGGTTTCTGAAGATTGTGGAGTGATTATATTTGAAGGCGTCTTTGCTTTGCATCCTGATATCCGAATATCGCTTGACTTGTGGATTGCTGTTGTTGGAGGTGTTCATTCACATTTGATTTCCCGAGTTCAAAGGGATAAGAGTAGAGTGGGATGCTTTATTTCTCAAAATGAGATCATGATGACAGTGTTTCCCATGTTCCAGCAGCTTATCGAACCTCATCTTGTTCATGCACATCTTAAAATTCGAAATGATTTTGACCCTGTGCTTTCTCCTGAGAGTTCATTATTTGTATTAAAGAGTAACAAAAAAGTAGCATATCAAGATATTGTTGCAATTCTTGATTCAGCAAAATTTTGCAGTTCGGTGCAGAAATTTATTGACATCTATATTAGGCTTCCTGGGATCCCTTCTAATGGACAGTTGAGAGACAGTGACTGTATTCGAGTCAGAATATGTGAAGGCAGATTTGCGTTGCTGATACGAGAGCCCATCAAAGAAGGGAACTTTATCATTCAGCCCAAAGTGGATTTTGATATTAGCATTAGTACGGTTGCTGGCCTTCTTAATCTTGGGTATCAAGCAGTTGCTTATATTGAAGCGTCTGCATTCATCTATCAGGATGGAAAGATTTTAATTGAGGTTGATCACCTTCAAGATGTACCTGGGCCATACATTCAGATAAAGGGTGTTAATAAAGATGCAGTAGCCGCAGCTGGTTCAATGCTTAAATTGGATAATTCATATACGACCAAGAGTTACCTTGAAATAATTTTGGAAAGACTACCGGGGATTGAAAGAACTTCTGGTGGGATTCATTCTCAACAACCAGCAAGGCTGCTAGAGATTGTTGAATTTATTCAATCTCAGGGCAGTAGCTCTGCTTCAGAATCCTCATCAGGTAGAGTAGTCTCTCCAATTGAAGGGGTTATTGAGGAGATGCAATCAAGGATTAGAAGGCTTGAAAAGTGGCTAGCGATAAATACGGTCCTATGGACAGTTCTGATGTCTGCCCTTGTTGGTTATTCACTGTATCAAAGAAGGAAGGCATAA 2850 0.4067 MDDEVVQRVFHEGGRDYFQQQPSTSSSSILQSLPLHVSFDHGCYLLVKSIQELREKKDGLVTVGIGGPSGSGKTSLAEKVASVIGCTVISMGNYRHGVDEGNDVDSIDFDTLIKNLEDLTKGKDTLIPKFDYQQKKRVGYKAIKSASSGVIVDGTYALHAKLRSLLDIRVAVVGGVHFSLLSKVRYDIGDSCSLDYLIDSIFPLFRKHIEPDLHHAQIRINNSFVSSFREAIYKVKCRSESTDGHSGSAFQGNEAQTDNFIEMYLRPPSSSEEARINDWIKVRQSGIRYYLSLGDQRIVDKNFIIRPKAEFEVGRMTLGGLLALGYTVVVSYKRASTTVNNGKVTISFETIDVLGETFMVMRGTNRKTVGTEASRMGIDGPWITKSYLEMILERKGVPRLSTPPLVSNTTVAGSQETAIIAPKPIRVTPNVVTGLEDLPQPWTRSPTKSKMEPVVAAWQFISSDSSQPDNSVLDPSSFRDSIRLAPMPDSFDLDRGLLLAVQAIQALLENKGFPVIVGIGGPSGSGKTSLAHKMANIIGCEVVSLESYYKQVKDFKYDDFNALDLSLLSKNIDDIRNGQRTKVPIFDLESGARNGFKELEVSEDCGVIIFEGVFALHPDIRISLDLWIAVVGGVHSHLISRVQRDKSRVGCFISQNEIMMTVFPMFQQLIEPHLVHAHLKIRNDFDPVLSPESSLFVLKSNKKVAYQDIVAILDSAKFCSSVQKFIDIYIRLPGIPSNGQLRDSDCIRVRICEGRFALLIREPIKEGNFIIQPKVDFDISISTVAGLLNLGYQAVAYIEASAFIYQDGKILIEVDHLQDVPGPYIQIKGVNKDAVAAAGSMLKLDNSYTTKSYLEIILERLPGIERTSGGIHSQQPARLLEIVEFIQSQGSSSASESSSGRVVSPIEGVIEEMQSRIRRLEKWLAINTVLWTVLMSALVGYSLYQRRKA 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g02630 949 SUPERFAMILY CYTH-like phosphatases 709 856 IPR033469 -
Viun3g02630 949 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 506 684 IPR027417 -
Viun3g02630 949 Gene3D - 699 861 - -
Viun3g02630 949 Gene3D - 513 690 IPR027417 -
Viun3g02630 949 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 61 173 IPR027417 -
Viun3g02630 949 CDD UMPK_like 62 223 - -
Viun3g02630 949 Pfam Phosphoribulokinase / Uridine kinase family 516 681 IPR006083 GO:0005524|GO:0016301
Viun3g02630 949 Pfam Phosphoribulokinase / Uridine kinase family 104 220 IPR006083 GO:0005524|GO:0016301
Viun3g02630 949 CDD UMPK_like 516 684 - -
Viun3g02630 949 PRINTS Uridine kinase signature 541 552 - -
Viun3g02630 949 PRINTS Uridine kinase signature 635 645 - -
Viun3g02630 949 PRINTS Uridine kinase signature 514 531 - -
Viun3g02630 949 PANTHER URIDINE KINASE 493 879 - -
Viun3g02630 949 Gene3D - 61 240 IPR027417 -
Viun3g02630 949 SMART AAA_5 59 208 IPR003593 GO:0016887
Viun3g02630 949 SMART AAA_5 513 657 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g02630 Viun-Chr3 26932313 26950663 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g02630 509 672 PRT Gene Family AT1G55810 27.528 3.66e-11 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g02630 - - gmx:100778905 1728.38