Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g02629 ATGGATGATGAAGTTGTTCAGCGAGTGTTCCATGAAGGAGGACGCGATTACTTCCAACAACAGCCTTCGACTTCTTCGTCTTCCATCCTCCAATCTCTCCCTCTCCATGTGTCTTTTGATCATGGATGTTATTTGTTGGTAAAATCTATTCAAGAACTCCGAGAGAAAAAGGATGGCCTTGTTACTGTTGGCATTGGTGGTCCAAGTGGATCTGGTAAAACAAGCTTAGCAGAAAAGGTGGCATCTGTTATTGGTTGTACCGTTATTTCAATGGGGAATTACCGTCATGGGGTTGATGAAGGGAATGATGTGGATTCTATAGATTTTGATACGCTGATCAAGAATCTTGAGGATTTGACTAAAGGCAAGGATACATTAATCCCAAAGTTTGACTATCAGCAAAAGAAGCGTGTTGGCTATAAAGCAATAAAGAGCGCTTCATCTGGGGTGGTAATAGTTGACGGCACATATGCATTGCATGCAAAACTGCGGTCTTTACTGGACATTCGAGTTGCTGTGGTTGGTGGTGTACATTTTAGCTTGCTTTCTAAAGTTCGCTACGACATTGGAGATTCTTGTTCACTGGATTACCTTATAGATAGCATTTTTCCACTGTTTAGGAAACACATTGAGCCAGATCTTCATCATGCACAGATCAGAATTAATAACAGCTTTGTCTCATCATTCAGAGAGGCAATCTACAAGGTCAAATGCAGAAGTGAGTCTACAGATGGACATTCAGGTTCCGCTTTTCAAGGAAATGAAGCCCAAACAGACAATTTTATTGAAATGTACCTTAGACCGCCTTCATCTAGTGAAGAAGCAAGGATAAATGATTGGATCAAAGTGCGGCAGTCTGGAATTAGATATTATCTATCACTTGGTGACCAGAGGATTGTCGACAAGAATTTCATTATCAGGCCTAAAGCTGAATTTGAGGTTGGTCGAATGACATTGGGTGGGCTGTTGGCTCTTGGGTATACTGTTGTGGTTAGTTATAAGCGTGCATCGACAACTGTCAATAATGGCAAGGTTACCATCTCTTTTGAGACCATTGATGTTCTTGGTGAGACATTTATGGTGATGAGAGGAACTAATAGAAAGACTGTTGGAACGGAAGCATCAAGGATGGGTATTGATGGACCTTGGATTACCAAATCATATCTGGAAATGATTCTGGAGAGAAAAGGTGTACCTCGTCTTAGTACTCCACCACTTGTGTCTAATACTACTGTGGCTGGTAGTCAAGAAACAGCGATCATTGCCCCAAAGCCAATCCGCGTTACTCCTAATGTTGTTACTGGGCTTGAGGATTTACCCCAGCCATGGACTCGATCCCCAACAAAATCTAAAATGGAACCTGTTGTGGCTGCATGGCAGTTCATATCTTCAGATTCCTCCCAGCCTGACAATTCAGTCCTAGATCCTTCATCTTTCAGGGATAGTATTAGGCTTGCTCCAATGCCTGATTCATTTGACTTGGACAGGGGATTGCTTTTGGCTGTTCAAGCAATACAAGCATTGTTGGAGAATAAAGGTTTCCCAGTCATAGTTGGAATTGGAGGTCCAAGTGGGTCTGGGAAGACTAGTTTGGCTCATAAAATGGCAAATATAATTGGTTGTGAAGTAGTTTCCCTGGAAAGCTATTATAAACAAGTAAAGGATTTTAAATATGATGACTTCAACGCACTTGATTTATCTTTGCTATCTAAGAACATTGATGACATAAGAAATGGCCAAAGAACAAAAGTACCTATATTTGATTTGGAAAGTGGTGCTCGGAATGGTTTCAAGGAGCTTGAGGTTTCTGAAGATTGTGGAGTGATTATATTTGAAGGCGTCTTTGCTTTGCATCCTGATATCCGAATATCGCTTGACTTGTGGATTGCTGTTGTTGGAGGTGTTCATTCACATTTGATTTCCCGAGTTCAAAGGGATAAGAGTAGAGTGGGATGCTTTATTTCTCAAAATGAGATCATGATGACAGTGTTTCCCATGTTCCAGCAGCTTATCGAACCTCATCTTGTTCATGCACATCTTAAAATTCGAAATGATTTTGACCCTGTGCTTTCTCCTGAGAGTTCATTATTTGTATTAAAGAGTAACAAAAAAGTAGCATATCAAGATATTGTTGCAATTCTTGATTCAGCAAAATTTTGCAGTTCGGTGCAGAAATTTATTGACATCTATATTAGGCTTCCTGGGATCCCTTCTAATGGACAGTTGAGAGACAGTGACTGTATTCGAGTCAGAATATGTGAAGGCAGATTTGCGTTGCTGATACGAGAGCCCATCAAAGAAGGGAACTTTATCATTCAGCCCAAAGTGGATTTTGATATTAGCATTAGTACGGTTGCTGGCCTTCTTAATCTTGGGTATCAAGCAGTTGCTTATATTGAAGCGTCTGCATTCATCTATCAGGATGGAAAGATTTTAATTGAGGTTGATCACCTTCAAGATGTACCTGGGCCATACATTCAGATAAAGGGTGTTAATAAAGATGCAGTAGCCGCAGCTGGTTCAATGCTTAAATTGGATAATTCATATACGACCAAGAGTTACCTTGAAATAATTTTGGAAAGACTACCGGGGATTGAAAGAACTTCTGGTGGGATTCATTCTCAACAACCAGCAAGGCTGCTAGAGATTGTTGAATTTATTCAATCTCAGGGCAGTAGCTCTGCTTCAGAATCCTCATCAGGTAGAGTAGTCTCTCCAATTGAAGGGGTTATTGAGGAGATGCAATCAAGGATTAGAAGGCTTGAAAAGTGGCTAGCGATAAATACGGTCCTATGGACAGTTCTGATGTCTGCCCTTGTTGGTTATTCACTGTATCAAAGAAGGAAGGCATAA 2853 0.4069 MDDEVVQRVFHEGGRDYFQQQPSTSSSSILQSLPLHVSFDHGCYLLVKSIQELREKKDGLVTVGIGGPSGSGKTSLAEKVASVIGCTVISMGNYRHGVDEGNDVDSIDFDTLIKNLEDLTKGKDTLIPKFDYQQKKRVGYKAIKSASSGVVIVDGTYALHAKLRSLLDIRVAVVGGVHFSLLSKVRYDIGDSCSLDYLIDSIFPLFRKHIEPDLHHAQIRINNSFVSSFREAIYKVKCRSESTDGHSGSAFQGNEAQTDNFIEMYLRPPSSSEEARINDWIKVRQSGIRYYLSLGDQRIVDKNFIIRPKAEFEVGRMTLGGLLALGYTVVVSYKRASTTVNNGKVTISFETIDVLGETFMVMRGTNRKTVGTEASRMGIDGPWITKSYLEMILERKGVPRLSTPPLVSNTTVAGSQETAIIAPKPIRVTPNVVTGLEDLPQPWTRSPTKSKMEPVVAAWQFISSDSSQPDNSVLDPSSFRDSIRLAPMPDSFDLDRGLLLAVQAIQALLENKGFPVIVGIGGPSGSGKTSLAHKMANIIGCEVVSLESYYKQVKDFKYDDFNALDLSLLSKNIDDIRNGQRTKVPIFDLESGARNGFKELEVSEDCGVIIFEGVFALHPDIRISLDLWIAVVGGVHSHLISRVQRDKSRVGCFISQNEIMMTVFPMFQQLIEPHLVHAHLKIRNDFDPVLSPESSLFVLKSNKKVAYQDIVAILDSAKFCSSVQKFIDIYIRLPGIPSNGQLRDSDCIRVRICEGRFALLIREPIKEGNFIIQPKVDFDISISTVAGLLNLGYQAVAYIEASAFIYQDGKILIEVDHLQDVPGPYIQIKGVNKDAVAAAGSMLKLDNSYTTKSYLEIILERLPGIERTSGGIHSQQPARLLEIVEFIQSQGSSSASESSSGRVVSPIEGVIEEMQSRIRRLEKWLAINTVLWTVLMSALVGYSLYQRRKA 950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g02629 950 CDD UMPK_like 62 224 - -
Viun3g02629 950 Gene3D - 700 862 - -
Viun3g02629 950 Pfam Phosphoribulokinase / Uridine kinase family 517 682 IPR006083 GO:0005524|GO:0016301
Viun3g02629 950 Pfam Phosphoribulokinase / Uridine kinase family 104 221 IPR006083 GO:0005524|GO:0016301
Viun3g02629 950 CDD UMPK_like 517 685 - -
Viun3g02629 950 PANTHER URIDINE KINASE 11 263 - -
Viun3g02629 950 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 61 174 IPR027417 -
Viun3g02629 950 Gene3D - 514 691 IPR027417 -
Viun3g02629 950 Gene3D - 61 241 IPR027417 -
Viun3g02629 950 SUPERFAMILY CYTH-like phosphatases 710 857 IPR033469 -
Viun3g02629 950 PRINTS Uridine kinase signature 515 532 - -
Viun3g02629 950 PRINTS Uridine kinase signature 542 553 - -
Viun3g02629 950 PRINTS Uridine kinase signature 636 646 - -
Viun3g02629 950 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 507 685 IPR027417 -
Viun3g02629 950 SMART AAA_5 59 209 IPR003593 GO:0016887
Viun3g02629 950 SMART AAA_5 514 658 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g02629 Viun-Chr3 26932313 26950663 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g02629 510 673 PRT Gene Family AT1G55810 27.528 3.48e-11 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g02629 - - gmx:100778905 1734.54