Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g02623 ATGTTGTTGAGTTCATTTTGTGTGAAATGGTCATTCATGTGGTTGAACGCCACCAACTTGCATCCAATTCTAACCTTTCTGTTCACTCTCATCACTGTGCTATGGTTGCTACAGTGGTTCAGGAATTCAACCAATGAAGCATCATCTCCTTTGCCTCCAGGTCCTACAGGTCTTCCATTTCTTGGCTACCTTCCCTTTCTAGGAAACCATCCCCACCTCAAATTTCACAAGCTGGCACAACTCTATGGACCCATCTACAAGCTCATGTTGGGAACAAAAACAATCGTGGTGGTTAGTTCACCCTCTCTGGTGAGAGAGATAGTGCGTGACCAAGACACCATATTTGCGAACCGGGAGCCTCTCATTGCTGCATTGGTTGCCTTGTACGGTGGCACTGACATAGCCTCTTTGCCTCACGGTCCACAGCGGAGGAAGGCTCGCAAGATATTGGTACGTGAGATGCTCAGCGGCACCAACATGACTAACTCTTTTTCTCATAGGAGAGTGGAGATTAAGAACTCCATCAGGGATGTGTACCAAAACAAAATAGGGTGCCCCACAAACGTTGGCGAGTTGGCTTTTCTAACAGCTACAAATGCAATAATGAGTATGATTTGGGGTGAGACTTTGCAAGAAGAAGAAGGAGTTGCTATTGGGGTTGAGTTTCGAGCCGTTGTGTCAGAACTTATGGTGTTACTAGGGAAGCCAAATGTTTCGGATCTTTTCCCGGCTCTGGCATGGTTAGATTTACAAGGAATTGAGAGAAGAACCAGAAAGGTGTCCCAGTGGATTGATAGGCTCTTTGATTCTGCCATTGAAAAGCGAATGAATGTGACTGAGAAGGGAGAAAATAAGTCAAACAAAGATTTCCTGCAGTATCTTTTGGAGCTTACAAAGAGTGATAGTGAGTCAGCATCAATGACCATGAAGGAGATCAAAGCAATTCTCTTAGATATAGTGGTGGGTGGAACAGAGACAACATCAACAACATTGGAATGGGTGGTAGCGAAGCTGATGCAGCATCCTGAGGCAATGAAGAGAGTTGAAGAAGAGATGGATACTGTAATAGGATTGGACAAGGGTATTGAATCAGAATCCCAATTGTTGAAATTACAGTACTTAGAAGCTGTGATAAAGGAAACACTTCGTTTGCATCCTCCTCTTCCCTTTTTGGTACCTCATTGCCCAAGTCAAAGCAGCAGTGTTGGTGGATATACCATTCCAAAAGGTGCACAGGTATTGTTGAACGTGTTGACAATACAGAGAGACCCTGAGATTTGGGAAGATGCATTAGAATTTCGACCAGAGAGGTTTCTGAGTGATGATGGGAAGTTGGATTACTGGGGCAACAAATTTGAGTATCTTCCTTTTGGATCTGGAAGAAGAATCTGTGCAGGGCTACCTCTAGCTGAGAAGATGATAATGTTTATGCTAGCTTCCTTCTTGCATTACTTTGAGTGGAGATTACCCAGTGGAACAGTGCTTGAATTTTCAGGAAAATTTGGCCTTGTAGTCAAGAAAACCAAGCCACTGGTTCTTATTCCAAAGCCTAGACTATCTAAACCACAACTCTACATATGA 1581 0.4371 MLLSSFCVKWSFMWLNATNLHPILTFLFTLITVLWLLQWFRNSTNEASSPLPPGPTGLPFLGYLPFLGNHPHLKFHKLAQLYGPIYKLMLGTKTIVVVSSPSLVREIVRDQDTIFANREPLIAALVALYGGTDIASLPHGPQRRKARKILVREMLSGTNMTNSFSHRRVEIKNSIRDVYQNKIGCPTNVGELAFLTATNAIMSMIWGETLQEEEGVAIGVEFRAVVSELMVLLGKPNVSDLFPALAWLDLQGIERRTRKVSQWIDRLFDSAIEKRMNVTEKGENKSNKDFLQYLLELTKSDSESASMTMKEIKAILLDIVVGGTETTSTTLEWVVAKLMQHPEAMKRVEEEMDTVIGLDKGIESESQLLKLQYLEAVIKETLRLHPPLPFLVPHCPSQSSSVGGYTIPKGAQVLLNVLTIQRDPEIWEDALEFRPERFLSDDGKLDYWGNKFEYLPFGSGRRICAGLPLAEKMIMFMLASFLHYFEWRLPSGTVLEFSGKFGLVVKKTKPLVLIPKPRLSKPQLYI 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g02623 526 SUPERFAMILY Cytochrome P450 52 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g02623 526 PANTHER OS08G0547900 PROTEIN 15 525 - -
Viun3g02623 526 Pfam Cytochrome P450 52 511 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g02623 526 Gene3D Cytochrome P450 38 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g02623 526 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 457 466 IPR017972 GO:0005506|GO:0016705
Viun3g02623 526 PRINTS P450 superfamily signature 455 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g02623 526 PRINTS P450 superfamily signature 376 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g02623 526 PRINTS P450 superfamily signature 322 339 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g02623 526 PRINTS P450 superfamily signature 464 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g02623 526 FunFam Predicted protein 320 513 - -
Viun3g02623 526 CDD CYP76-like 79 515 - -
Viun3g02623 526 PRINTS E-class P450 group I signature 196 214 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g02623 526 PRINTS E-class P450 group I signature 454 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g02623 526 PRINTS E-class P450 group I signature 331 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g02623 526 PRINTS E-class P450 group I signature 79 98 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g02623 526 PRINTS E-class P450 group I signature 416 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g02623 526 PRINTS E-class P450 group I signature 311 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g02623 526 PRINTS E-class P450 group I signature 103 124 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g02623 526 PRINTS E-class P450 group I signature 375 393 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g02623 526 PRINTS E-class P450 group I signature 464 487 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g02623 Viun-Chr3 26814974 26816708 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g02623 16 526 Cytochrome P450 AT4G12320 46.408 2.71e-163 472
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g02623 - - gmx:100785686 820.846