Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g02614 ATGGAAGGAAGCACAGAAAGTGATACTGGGTTTTGTGGTTCTCCTACGATAGTTCAGGTTTTTCAAAAGGTATTTGCAGAGTTGATAGGGACATATTTTTTAGTATTTGCTGGGTGTTGCTCTGTGGTTCTTAATAATTCAGAAAAGACTAAAGGGGTAATAACATTACCGGGAGTTGCCTTAGTGTGGGGTTTCACAGTAACGATCTTGGCTTATTCTCTTGGTCACGTCTCTGGTGCTCATCTCAATCCTGCAGTCACTCTCAGCTTAGCTATCTATCGTCGCTTCCCTTTCAAAATGGTGCCTTTGTATTTTATTGCGCAAATATTGGGATCTTTCCTTGCTAGTGGGTCGTTGTACTTTCTGTTTGAAATAGACGATAATTCTTATTTTGGAACAAGGCCAGCAGGATCTCAAGTTCAATCTCTTGTTTTTGAGTTACTTACAACATTTCTCTTAATGTTCGTTGTTTGTGCAGTTTCAACGGATAAAAGAGCGATTGGAAAATTAGGAGGGATTGCTGTTGGTATGGCAGTTATAGTAGACGTCTTCATTGCTGGACCTGTGTCAGGAGCTTCGATGAACCCAGCTAGAAGCCTTGGACCTGCTTTGGTGATGAACGTTTACACTGGATTTTGGATTTATATAGCTGGACCATTTGTTGGTGCCATACTTGGTGCAACGTTTTATAACTTTATTAGACACACCAATAAACCACTTAGGGATATTGCCTCCAATTCAAAAATACTTAAAGTAGCATCTATGTCAAGTTTTCCATAG 780 0.3987 MEGSTESDTGFCGSPTIVQVFQKVFAELIGTYFLVFAGCCSVVLNNSEKTKGVITLPGVALVWGFTVTILAYSLGHVSGAHLNPAVTLSLAIYRRFPFKMVPLYFIAQILGSFLASGSLYFLFEIDDNSYFGTRPAGSQVQSLVFELLTTFLLMFVVCAVSTDKRAIGKLGGIAVGMAVIVDVFIAGPVSGASMNPARSLGPALVMNVYTGFWIYIAGPFVGAILGATFYNFIRHTNKPLRDIASNSKILKVASMSSFP 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g02614 259 PANTHER AQUAPORIN NIP2-1 8 241 IPR034294 -
Viun3g02614 259 SUPERFAMILY Aquaporin-like 18 239 IPR023271 -
Viun3g02614 259 CDD MIP 22 233 IPR000425 GO:0015267|GO:0016020|GO:0055085
Viun3g02614 259 ProSitePatterns MIP family signature. 81 89 IPR022357 -
Viun3g02614 259 Pfam Major intrinsic protein 18 230 IPR000425 GO:0015267|GO:0016020|GO:0055085
Viun3g02614 259 Gene3D Glycerol uptake facilitator protein. 4 244 IPR023271 -
Viun3g02614 259 NCBIfam MIP family channel protein 26 230 IPR000425 GO:0015267|GO:0016020|GO:0055085
Viun3g02614 259 PRINTS Major intrinsic protein family signature 145 163 IPR000425 GO:0015267|GO:0016020|GO:0055085
Viun3g02614 259 PRINTS Major intrinsic protein family signature 176 198 IPR000425 GO:0015267|GO:0016020|GO:0055085
Viun3g02614 259 PRINTS Major intrinsic protein family signature 63 87 IPR000425 GO:0015267|GO:0016020|GO:0055085
Viun3g02614 259 PRINTS Major intrinsic protein family signature 22 41 IPR000425 GO:0015267|GO:0016020|GO:0055085
Viun3g02614 259 PRINTS Major intrinsic protein family signature 100 119 IPR000425 GO:0015267|GO:0016020|GO:0055085
Viun3g02614 259 PRINTS Major intrinsic protein family signature 213 233 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g02614 Viun-Chr3 26678051 26680075 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g02614 8 256 Major Intrinsic Protein MIP AT5G37810 54.217 4.43e-95 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g02614 K09874 - gmx:100819179 399.053