Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g02601 ATGGGAAAAACAACCAAAAACATTTTCTCCTTCTTTCTACTCTGCTCAGTCCTACTTCACCTTTACTTTTCCGAAGGGGTAGTAGCACAAGAGGTAGCAAAATCCGAGAGCGACGCATTAGGGGAACCAGAGAAAAGAGAAACACTAGAAATTATAATAGGTGGAGGTTCGCCTATAATAGGTGGTGGAGGTTCCCCTGCTCCTGCCCCTGAAACTCCATGCCCCCCTCCACCACCCAAACCGCTTAACCGTTTAGAAAGAGCACGTCGCGTGCTTCTCAATTTCAAAACCCTCATCGATGACCCAACCTGTTACACGCAAAACTGGAACGAGAACACTTACGTGTGTGACTTCAGGGGGATACGATGCGCCACGTATCCAAAGGAGGACCAGAAAGCAGTTGCAGGATTGGACTTAAACGGAGCAAGAGTGACGGGTAAAAACGGGTGCGCTTTGCCCCTCTCATCTCTCTTGGGCGTGAACCAAATACCCGAGCTCACATTCTTCCACGTCAACTCCAATGGCTTCGCCGGCACTGTCCCCACCGATGTCATCAAATTCCCCTTCTTCTTCGAGCTCGACCTCAGTAACAACAAAGTCAAAGGCCAGTTTCCCCTCGACGCGATTACGTCGAATCAGCTAGTCTTCCTGGACCTCCGCTTCAACGAACTCACCGGCCCAATTCCCTACCAACTCTTCCAGAAGGATCTCGATGTCATCTTCATCAACAACAACCATTTCACACAGTGCCTCCCCGAGAACTTCGGCTCCACGCCGGCCCGCTACCTCACTTTCGCCAACAACAACCTCACCGGCTCGATTCCCAAGAGCGTCGGTTTCGCACCCAACCTCACCGAAGTTCTCTTCCTCGGGAACCAGTTCGACGGCTGCTTGCCTGTTGAAATCGGAAACCTTAAAAAAGCTGTCGTCTTTGATGTGAGTAAGAATTCTATCACCGGCCCAATCCCTCTCTCCTTCGGCTGCTTGAAGAGCATTCAGTATCTCAATTTGGCTCAAAACAAATTCTACGGCTGTGTTCCCGACAATGTTTGTCAAATTCCTTCTCTCCGCAACAATGGGAATCTCTCCTTGGCCGACAATTACTTCAACGAGGTTGGCCCCTCCTGCTGGAGTTTGATCAAGTCCAAGGTTTTGGATGTCTCAAAGAATTGCATCCCTGGGCTGCCAAACCAAAGGTCACCCAACGAATGCTACCATTTTTACAAGACCAAGAAGACGTGTCCGAATCCGAGTTCTTTCTATACAGTGCCGTGTAAATCGCACTGGGGAAACCCCAGTTCCGAAACCACTGTTCCAACCTCTGCGCCGGTGACTTACAAGACTCTAAAACCGCATCGTTTGAGATTGTGA 1371 0.4989 MGKTTKNIFSFFLLCSVLLHLYFSEGVVAQEVAKSESDALGEPEKRETLEIIIGGGSPIIGGGGSPAPAPETPCPPPPPKPLNRLERARRVLLNFKTLIDDPTCYTQNWNENTYVCDFRGIRCATYPKEDQKAVAGLDLNGARVTGKNGCALPLSSLLGVNQIPELTFFHVNSNGFAGTVPTDVIKFPFFFELDLSNNKVKGQFPLDAITSNQLVFLDLRFNELTGPIPYQLFQKDLDVIFINNNHFTQCLPENFGSTPARYLTFANNNLTGSIPKSVGFAPNLTEVLFLGNQFDGCLPVEIGNLKKAVVFDVSKNSITGPIPLSFGCLKSIQYLNLAQNKFYGCVPDNVCQIPSLRNNGNLSLADNYFNEVGPSCWSLIKSKVLDVSKNCIPGLPNQRSPNECYHFYKTKKTCPNPSSFYTVPCKSHWGNPSSETTVPTSAPVTYKTLKPHRLRL 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g02601 456 Gene3D Ribonuclease Inhibitor 85 259 IPR032675 -
Viun3g02601 456 Gene3D Ribonuclease Inhibitor 260 412 IPR032675 -
Viun3g02601 456 Pfam Leucine rich repeat N-terminal domain 88 123 IPR013210 -
Viun3g02601 456 FunFam Leucine-rich repeat receptor protein kinase EMS1 251 349 - -
Viun3g02601 456 MobiDBLite consensus disorder prediction 62 82 - -
Viun3g02601 456 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 30 434 - -
Viun3g02601 456 MobiDBLite consensus disorder prediction 68 82 - -
Viun3g02601 456 SUPERFAMILY L domain-like 87 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g02601 Viun-Chr3 26175914 26177760 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g02601 84 445 Trihelix Transcription Factor Family AT4G33970 39.946 1.24e-74 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g02601 - - gmx:100796207 658.677