Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g02599 ATGATTTTACCTAAGCAATCTTCAGTTTCAACACTTCGCACCTTAACATTTTTTCTTTGCCTTCTCTTAGTAGGTTGCCAAATCCTTGAAACCCCATCACCACTATCGGATTCAATCCCACTAATCCCTGACCTTTTAAACTTCATAGACCAAAGACTCGCTCTGGTCTTCCCCATTATTCAAGCCTTCAAGAACACAATAACCTCAGATCCTTTGGGAATAACAGCAACATGGGTTGGTTCAGATATATGCAACTACACAGGCTTCTACTGTGACAACCCACCAGATAACCTCACTGCCACAACCATTGCCTCAATTGATTTCAATGGCTTTCAACTCACTGCTCCAACACTTGATGGCTTCATCGATCAACTCCCTGACCTCGCTCTTTTCCATGCGAACAGTAACAAATTTTCTGGCACCATATCGCCAAAAATAGCCGGACTCAAGTTCCTATACGAACTTGATTTAAGTAACAACTTGTTCTCCGGGTTATTCCCCACATCGGTCATCAACATCCCCACCTTATCCTTTTTGGACATTAGGTACAACTCTTTCACCGGCACGGTGCCCCCACAGATCTTCATGCAGACATTGGATGTTCTTTTCCTCAACAACAACAATTTCATGCTCACACTACCCAACAACCTAGGAGACACACCCGTCGTTTATCTCACTTTGGCCAACAACAAATTCACCGGGCCCATTCCCCGCAGCATTAGAAAAGCCTCGTCCACGTTGATCCAAGTGCTGCTTTTGAACAACCTTTTAACGGGTTGTCTTCCCTACGACATCGGGTTCTTGGGAAACGTGACGTTGTTCGATGCTGGTGGGAACCTCTTAACTGGGCCAATACCTTGGTCCTTTGGGTGCTTGAAGAAAGTGGAGCAGCTGAACCTTGCAAGGAACCTTTTGTATGGACAGGTTCCGGAAGTGGTGTGTGCGTTGGGGAATTTGGCGAATCTTTCATTGTCTTACAATTATTTTACGAAGGTGGGACCTTTGTGCAAGGGGCTGATTCAAAGAGGGGTTCTTGATGTGAGGAAAAACTGTATTATTGGTCTTCCGGATCAGAGATCAGCGAAGGAGTGCATGGCGTTTTTTTCGATTCCGAGGTCTTGTCCGAACCCTGCATCGTTTAATATCATACCGTGTCAAATTCATTTGACGAAACCACAAGAGACAACTAAGAGGCATTTGCTTTCATATTCTGCTCTTTCCAGAAATAGAGTGGTTTTGTAA 1242 0.4461 MILPKQSSVSTLRTLTFFLCLLLVGCQILETPSPLSDSIPLIPDLLNFIDQRLALVFPIIQAFKNTITSDPLGITATWVGSDICNYTGFYCDNPPDNLTATTIASIDFNGFQLTAPTLDGFIDQLPDLALFHANSNKFSGTISPKIAGLKFLYELDLSNNLFSGLFPTSVINIPTLSFLDIRYNSFTGTVPPQIFMQTLDVLFLNNNNFMLTLPNNLGDTPVVYLTLANNKFTGPIPRSIRKASSTLIQVLLLNNLLTGCLPYDIGFLGNVTLFDAGGNLLTGPIPWSFGCLKKVEQLNLARNLLYGQVPEVVCALGNLANLSLSYNYFTKVGPLCKGLIQRGVLDVRKNCIIGLPDQRSAKECMAFFSIPRSCPNPASFNIIPCQIHLTKPQETTKRHLLSYSALSRNRVVL 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g02599 413 Gene3D Ribonuclease Inhibitor 59 219 IPR032675 -
Viun3g02599 413 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Viun3g02599 413 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 39 391 - -
Viun3g02599 413 SUPERFAMILY L domain-like 62 354 - -
Viun3g02599 413 Gene3D Ribonuclease Inhibitor 221 412 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g02599 Viun-Chr3 26147069 26148488 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g02599 37 371 Leucine-rich Repeat extension Gene Families AT3G24480 46.866 1.46e-99 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g02599 - - gmx:100813314 678.322