Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g02560 ATGTTCTACGGGCTTCTCCCTTTGTTGGGAATGTTGGCTTTTCTTGGAATGCAGCTTCCTGTCATAATGGCTGATTGCCCTTTGAATTTTACTGGTTCAAACTTCACACTTGCATCCTCTCTATGCTCTAACCAGGGTGACAGAGGAAAATGCTGCCGGTACATCAATACTAATGTTGCAATTGCCGTTTCTCGTTTTGCTAATTCAACAGGCAACCTAGGGGTCTCTCAAAATGCGACTGATATCTGCCTCCAAACCATATTTCAAACCTTGCAACTTTATGGAGTTGCCCAAAATGCAACAGCTTTCTGTGGTTTCGGAACAAAAATTCCTGTTAATTATGAATGCAAGGGGAGAACTAGTGTTGTCCAAATGCTGCAATCCCCCAGATTTACGGAGGTCACAAAAAATTGCAAAGCACCACTGGGAGAGGAAAGTAAATGTAAGAAGTGTTTAAATGCGGGCATTGGTTATCTGCATCATATCGGAATTGAAGATAATATAACACTAAGTACATGTCGTGATGCCACTTTTGCTGCATTAGCGAGCCAAGTTGATGAGATATCTACTATTGACATTGCAATTTGTTTCTTTGGGGTTCAAGGACTTCTCAGGCTTCCTGTTCTAGAGTCAACACCATCCTTGCCTGCTCCTAAGGCTTCTCCAAGCCCACCTGTTTCTGATGGCCCGAGTCAACCATTGTTAAGTGCACCTTTAAAGGGAAAGCACCATTCATATCGTTTGACGTTAGTTCCAGGTATTGCTATTGCAGTTACAGCTGTTGCTGTTATCACACTCATAGTCTTGATAGTTCTAATTCGCCAGAAAAGCAGAGAGCTAGACAAGTCTGATAATTTTGGTAAACCCTGTTCGAAAACCTTACCTCCTTGTACAACATGGAAATTTCAGGAAGGTTCTTCATCTATGTTCCGAAAATTCAGCTACAAGGAGATAAAAAGGGCTACAGAGGATTTTAGCACTGTCATTGGTCAAGGGGGATTTGGAACTGTGTATAAAGCTGATTTTTCTGATGGCCTGGTCGCAGCAGTTAAACGGATGAATAGAATCTCTGAGCAGGGAGAGGATGAGTTTTGCAGAGAAATTGAGCTTCTTGCCCGGCTGCACCATCGGCATCTTGTTGCCTTGAGAGGCTTTTGCATTCAAAAACGTGAGAGGTTTCTATTGTATGAGTACATGGGAAATGGAAGCTTGAAAGATCATCTTCATTCCCCTGGTAAAACACCTTTAAGTTGGCGAACAAGAATCCAAATTGCCATTGATGTTGCCAATGCCCTGGAGTACCTCCATTTCTATTGCGATCCTCCTCTGTGTCACAGAGATATTAAATCTAGCAACACTTTACTGGATGAGAACTTTGTTGCCAAGATAGCTGATTTTGGCCTTGCACAAGCTTCAAAAGATGGCTCAGTATGCTTTGAACCTGTAAACACTGAAATTCGGGGAACTCCGGGTTATATGGACCCTGAATATGTTGTTACTCAAGAGCTCACCGAGAAAAGTGACATATACAGTTTTGGGGTGTTACTACTTGAAATTGTAACAGGAAGACGAGCCATTCAAGATAATAAGAATCTAGTTGAATGGGCCCAACCATACATGGAATCAGATACGAGATTATTGGAGCTAGTAGATCCCAATGTGAGGGAGTCTTTTGACTTGGATCAGCTCCAAACAGTAATCTCTATAGTAGCATGGTGTACCCATAGAGAGGGAAGAGCAAGGCCTTCAATAAAACAGGTACTTAGGCTTCTGTATGAGACATCAGAACCAATGCACAGTGAGTTTCTACAAGCTGTTGAAGATGAAGAATGTCAGGGAAGTCAGCATAGAGGCAGAAGAAGCAAGGGGAAAATGCTCAGAAATGAAGCATTGTTTAACAGCGGAGAGGGAAGATATCTTGCTTCATCTTCAAGTACATCCCGGTCATATTGCAGTAGAAGTTTTTTACTTGAGACTGGCTCTCCACAGTCTCCGCCAAATATGTTCTCTGTGTGA 2016 0.4236 MFYGLLPLLGMLAFLGMQLPVIMADCPLNFTGSNFTLASSLCSNQGDRGKCCRYINTNVAIAVSRFANSTGNLGVSQNATDICLQTIFQTLQLYGVAQNATAFCGFGTKIPVNYECKGRTSVVQMLQSPRFTEVTKNCKAPLGEESKCKKCLNAGIGYLHHIGIEDNITLSTCRDATFAALASQVDEISTIDIAICFFGVQGLLRLPVLESTPSLPAPKASPSPPVSDGPSQPLLSAPLKGKHHSYRLTLVPGIAIAVTAVAVITLIVLIVLIRQKSRELDKSDNFGKPCSKTLPPCTTWKFQEGSSSMFRKFSYKEIKRATEDFSTVIGQGGFGTVYKADFSDGLVAAVKRMNRISEQGEDEFCREIELLARLHHRHLVALRGFCIQKRERFLLYEYMGNGSLKDHLHSPGKTPLSWRTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNTLLDENFVAKIADFGLAQASKDGSVCFEPVNTEIRGTPGYMDPEYVVTQELTEKSDIYSFGVLLLEIVTGRRAIQDNKNLVEWAQPYMESDTRLLELVDPNVRESFDLDQLQTVISIVAWCTHREGRARPSIKQVLRLLYETSEPMHSEFLQAVEDEECQGSQHRGRRSKGKMLRNEALFNSGEGRYLASSSSTSRSYCSRSFLLETGSPQSPPNMFSV 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g02560 671 Pfam Protein kinase domain 327 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun3g02560 671 Gene3D Transferase(Phosphotransferase) domain 1 399 615 - -
Viun3g02560 671 ProSiteProfiles Protein kinase domain profile. 323 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun3g02560 671 Pfam SPARK 25 162 IPR043891 -
Viun3g02560 671 PANTHER OS01G0750732 PROTEIN 168 611 - -
Viun3g02560 671 ProSitePatterns Serine/Threonine protein kinases active-site signature. 443 455 IPR008271 GO:0004672|GO:0006468
Viun3g02560 671 SUPERFAMILY Protein kinase-like (PK-like) 304 594 IPR011009 -
Viun3g02560 671 ProSitePatterns Protein kinases ATP-binding region signature. 329 351 IPR017441 GO:0005524
Viun3g02560 671 FunFam Putative receptor-like protein kinase 399 599 - -
Viun3g02560 671 MobiDBLite consensus disorder prediction 217 231 - -
Viun3g02560 671 CDD STKc_IRAK 329 591 - -
Viun3g02560 671 FunFam Putative receptor-like protein kinase 291 398 - -
Viun3g02560 671 Gene3D Phosphorylase Kinase; domain 1 297 398 - -
Viun3g02560 671 SMART serkin_6 323 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun3g02560 671 MobiDBLite consensus disorder prediction 214 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g02560 Viun-Chr3 25267135 25273302 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g02560 24 670 Receptor kinase-like Gene Family AT3G19300 60.215 0.0 764
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Viun3g02560 Pkinase 3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g02560 - - gmx:100807955 1204.12