Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g02558 ATGAAAATAGTAATCAAATTTAGCCTCATAAATGCAACACCACCATCACTCAAGTCTTCCTCCTTCACATTTGTCTCAACTCCTTATCACTGTTTCAACAGAGATTGCCCTTTGAATTTTACTGGTTCAAACTTCACACTTGCATCCTCTCTATGCTCTAACCAGGGTGACAGAGGAAAATGCTGCCGGTACATCAATACTAATGTTGCAATTGCCGTTTCTCGTTTTGCTAATTCAACAGGCAACCTAGGGGTCTCTCAAAATGCGACTGATATCTGCCTCCAAACCATATTTCAAACCTTGCAACTTTATGGAGTTGCCCAAAATGCAACAGCTTTCTGTGGTTTCGGAACAAAAATTCCTGTTAATTATGAATGCAAGGGGAGAACTAGTGTTGTCCAAATGCTGCAATCCCCCAGATTTACGGAGGTCACAAAAAATTGCAAAGCACCACTGGGAGAGGAAAGTAAATGTAAGAAGTGTTTAAATGCGGGCATTGGTTATCTGCATCATATCGGAATTGAAGATAATATAACACTAAGTACATGTCGTGATGCCACTTTTGCTGCATTAGCGAGCCAAGTTGATGAGATATCTACTATTGACATTGCAATTTGTTTCTTTGGGGTTCAAGGACTTCTCAGGCTTCCTGTTCTAGAGTCAACACCATCCTTGCCTGCTCCTAAGGCTTCTCCAAGCCCACCTGTTTCTGATGGCCCGAGTCAACCATTGTTAAGTGCACCTTTAAAGGGAAAGCACCATTCATATCGTTTGACGTTAGTTCCAGGTATTGCTATTGCAGTTACAGCTGTTGCTGTTATCACACTCATAGTCTTGATAGTTCTAATTCGCCAGAAAAGCAGAGAGCTAGACAAGTCTGATAATTTTGGTAAACCCTGTTCGAAAACCTTACCTCCTTGTACAACATGGAAATTTCAGGAAGGTTCTTCATCTATGTTCCGAAAATTCAGCTACAAGGAGATAAAAAGGGCTACAGAGGATTTTAGCACTGTCATTGGTCAAGGGGGATTTGGAACTGTGTATAAAGCTGATTTTTCTGATGGCCTGGTCGCAGCAGTTAAACGGATGAATAGAATCTCTGAGCAGGGAGAGGATGAGTTTTGCAGAGAAATTGAGCTTCTTGCCCGGCTGCACCATCGGCATCTTGTTGCCTTGAGAGGCTTTTGCATTCAAAAACGTGAGAGGTTTCTATTGTATGAGTACATGGGAAATGGAAGCTTGAAAGATCATCTTCATTCCCCTGGTAAAACACCTTTAAGTTGGCGAACAAGAATCCAAATTGCCATTGATGTTGCCAATGCCCTGGAGTACCTCCATTTCTATTGCGATCCTCCTCTGTGTCACAGAGATATTAAATCTAGCAACACTTTACTGGATGAGAACTTTGTTGCCAAGATAGCTGATTTTGGCCTTGCACAAGCTTCAAAAGATGGCTCAGTATGCTTTGAACCTGTAAACACTGAAATTCGGGGAACTCCGGGTTATATGGACCCTGAATATGTTGTTACTCAAGAGCTCACCGAGAAAAGTGACATATACAGTTTTGGGGTGTTACTACTTGAAATTGTAACAGGAAGACGAGCCATTCAAGATAATAAGAATCTAGTTGAATGGGCCCAACCATACATGGAATCAGATACGAGATTATTGGAGCTAGTAGATCCCAATGTGAGGGAGTCTTTTGACTTGGATCAGCTCCAAACAGTAATCTCTATAGTAGCATGGTGTACCCATAGAGAGGGAAGAGCAAGGCCTTCAATAAAACAGGTACTTAGGCTTCTGTATGAGACATCAGAACCAATGCACAGTGAGTTTCTACAAGCTGTTGAAGATGAAGAATGTCAGGGAAGTCAGCATAGAGGCAGAAGAAGCAAGGGGAAAATGCTCAGAAATGAAGCATTGTTTAACAGCGGAGAGGGAAGATATCTTGCTTCATCTTCAAGTACATCCCGGTCATATTGCAGTAGAAGTTTTTTACTTGAGACTGGCTCTCCACAGTCTCCGCCAAATATGTTCTCTGTGTGA 2046 0.4194 MKIVIKFSLINATPPSLKSSSFTFVSTPYHCFNRDCPLNFTGSNFTLASSLCSNQGDRGKCCRYINTNVAIAVSRFANSTGNLGVSQNATDICLQTIFQTLQLYGVAQNATAFCGFGTKIPVNYECKGRTSVVQMLQSPRFTEVTKNCKAPLGEESKCKKCLNAGIGYLHHIGIEDNITLSTCRDATFAALASQVDEISTIDIAICFFGVQGLLRLPVLESTPSLPAPKASPSPPVSDGPSQPLLSAPLKGKHHSYRLTLVPGIAIAVTAVAVITLIVLIVLIRQKSRELDKSDNFGKPCSKTLPPCTTWKFQEGSSSMFRKFSYKEIKRATEDFSTVIGQGGFGTVYKADFSDGLVAAVKRMNRISEQGEDEFCREIELLARLHHRHLVALRGFCIQKRERFLLYEYMGNGSLKDHLHSPGKTPLSWRTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNTLLDENFVAKIADFGLAQASKDGSVCFEPVNTEIRGTPGYMDPEYVVTQELTEKSDIYSFGVLLLEIVTGRRAIQDNKNLVEWAQPYMESDTRLLELVDPNVRESFDLDQLQTVISIVAWCTHREGRARPSIKQVLRLLYETSEPMHSEFLQAVEDEECQGSQHRGRRSKGKMLRNEALFNSGEGRYLASSSSTSRSYCSRSFLLETGSPQSPPNMFSV 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g02558 681 Pfam SPARK 34 172 IPR043891 -
Viun3g02558 681 FunFam Putative receptor-like protein kinase 301 408 - -
Viun3g02558 681 MobiDBLite consensus disorder prediction 224 244 - -
Viun3g02558 681 FunFam Putative receptor-like protein kinase 409 609 - -
Viun3g02558 681 ProSitePatterns Protein kinases ATP-binding region signature. 339 361 IPR017441 GO:0005524
Viun3g02558 681 ProSiteProfiles Protein kinase domain profile. 333 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun3g02558 681 CDD STKc_IRAK 339 601 - -
Viun3g02558 681 Gene3D Transferase(Phosphotransferase) domain 1 409 625 - -
Viun3g02558 681 SMART serkin_6 333 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun3g02558 681 ProSitePatterns Serine/Threonine protein kinases active-site signature. 453 465 IPR008271 GO:0004672|GO:0006468
Viun3g02558 681 Pfam Protein kinase domain 337 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun3g02558 681 MobiDBLite consensus disorder prediction 227 241 - -
Viun3g02558 681 Gene3D Phosphorylase Kinase; domain 1 307 408 - -
Viun3g02558 681 SUPERFAMILY Protein kinase-like (PK-like) 314 604 IPR011009 -
Viun3g02558 681 PANTHER OS01G0750732 PROTEIN 178 621 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g02558 Viun-Chr3 25267135 25273718 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g02558 36 680 Receptor kinase-like Gene Family AT3G19300 60.247 0.0 763
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Viun3g02558 Pkinase 3.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g02558 - - gmx:100807955 1171.76