LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Viun3g02545	ATGGACAACGAAATTGTTGACAATGACAACAATGTTGACCTTGTTCCTAGAGTCCACATATGCTTCGAGACACTTGATGCAGTTAAAAAATTTTATAGAGACTTTGCGATTAGAACTGGATTTGGTATTAGAATAAGAAGTTCAAAGAAGGGAAAGGACAACGAACTTAAACATGTTAAGCTTGTTTGTTCTTGTGAAGGTAATTATGTCTCCACCATACGTCCAGTTGGAATATCGATTGGTAAAAAAGATGGCAAATGGCACATAAAAAATGTTGTCATGGAACACAGTCACGATATCAGTCCAAAAGAATCAAGGCTGATATCAAGGAATCGAAAAGTTAATATGCATGCCAGGCAAATAGTTGACATCAATGACGAAGCCGGGGTACGCATCAACAAGAGTTATCGTTCGTTAGTTTGTGAAGCTAGAGGATATGACAATGTTTCTTTTATTGATCGAGATGTTAGGAACTACATAGCTCATAAAAGAAGGTCATTATGCAAAGATGGACAAGCTTTGCTTCGACACTTTTCCCACATGCGTGAAGTAAACAATGATTTCTTCTTTGAAATTGGCATGGATGAAGATAATAGAATATGA	603	0.3665	MDNEIVDNDNNVDLVPRVHICFETLDAVKKFYRDFAIRTGFGIRIRSSKKGKDNELKHVKLVCSCEGNYVSTIRPVGISIGKKDGKWHIKNVVMEHSHDISPKESRLISRNRKVNMHARQIVDINDEAGVRINKSYRSLVCEARGYDNVSFIDRDVRNYIAHKRRSLCKDGQALLRHFSHMREVNNDFFFEIGMDEDNRI	200

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Viun3g02545	200	PANTHER	FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED	7	158	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Viun3g02545	Viun-Chr3	25087923	25088525	Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Viun3g02545		None	None	None

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Viun3g02545	-		-	vun:114180824	272.322