Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g02544 ATGAACTTCAGGAACTACGATGATAATAACCCCACTTGGGATGCCATGCATGGGAAGACACCGTCGGCAAATGTTGGTTCTCTGCTGAGACAGCCATCATCAGTATACTCCCTTACATTTGATGAGTTTCAGAGCACCATGGGTGGGGTTGGGAAGGAATTTGGGTCCATGAACATGGATGAACTCTTGAAGAACATTTGGACAGCTGAAGAGACTCAGGCCCTGGCATTTTCAGCTGGTATAGGAGAAGGCCACAACCTTAACTCAGTCAGTGGTGGTTTGCAAAGACAGGGTTCTTTGACATTGCCAAGGACTCTTAGTCAGAAAACAGTAGATGAGGTTTGGAGGGACTTGATCAAAGATAGTGGTGGGACCAATGATGGGAATGGCAATGGCAATGGCAATGGTGGTTCATCCATTCCTCAAAGGCAACCAACATTGGGAGAAATGACCTTAGAGGAGTTTTTGGTGAGAGCTGGGGTGGTGAGAGAAGATGTGCCTCAACAACAACAAATTGGAAAACCAAATAACAGTGGATGGTTTGGTAACTTTCCTAGACCAAACAATAACAATGGCCTACTTCTTGGTTTCCAACAACCTAATAGAAGTAATGGGAATATGGGTGAGAGGGTGGTGGAGACCAACAATAACTTAGCTCCCAAACAACCTCCTCCTTTACCTCTAAACTCAAACCACTCTCACCGACCGACACAACATCCACCACCACTTTTTCCAAAGCCTGCAAATGTAGCTTTTGCTGCTCCTATGCATTTGTTGAATAGTGCTCCACTTGCTAGCCCTGGCAGAAGAGGAGGGTTGATTGAGCATTCATTGAATGTTGGAATGGTTGGTTTAGCCTCGGGTAATCCAGAGGCTTCTCCCTCAAGGAAAATATCATCAGATGTAATTACAAGAACTAATGTAGACAACTCTTCACTGTCTCCAGTTCCTTATGCAATCAACAGGGGAAGAAAATGCAGCGCTATAGAGAAAGTGGTTGAGAGAAGACAAAGGAGAATGATAAAAAATAGAGAATCAGCTGCCAGGTCACGGGCTCGTAAGCAGGCCTACACTTTCGAACTGGAAGCTGAAGTTGCAAAACTTAAGGAAATAAACAGAGAATTGCAAAAAAAAACAGGCAGAAATTAA 1149 0.4421 MNFRNYDDNNPTWDAMHGKTPSANVGSLLRQPSSVYSLTFDEFQSTMGGVGKEFGSMNMDELLKNIWTAEETQALAFSAGIGEGHNLNSVSGGLQRQGSLTLPRTLSQKTVDEVWRDLIKDSGGTNDGNGNGNGNGGSSIPQRQPTLGEMTLEEFLVRAGVVREDVPQQQQIGKPNNSGWFGNFPRPNNNNGLLLGFQQPNRSNGNMGERVVETNNNLAPKQPPPLPLNSNHSHRPTQHPPPLFPKPANVAFAAPMHLLNSAPLASPGRRGGLIEHSLNVGMVGLASGNPEASPSRKISSDVITRTNVDNSSLSPVPYAINRGRKCSAIEKVVERRQRRMIKNRESAARSRARKQAYTFELEAEVAKLKEINRELQKKTGRN 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g02544 382 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 333 378 IPR004827 GO:0003700|GO:0006355
Viun3g02544 382 MobiDBLite consensus disorder prediction 124 144 - -
Viun3g02544 382 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 333 381 - -
Viun3g02544 382 CDD bZIP_plant_BZIP46 335 378 - -
Viun3g02544 382 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 338 353 IPR004827 GO:0003700|GO:0006355
Viun3g02544 382 MobiDBLite consensus disorder prediction 169 187 - -
Viun3g02544 382 Gene3D - 333 381 - -
Viun3g02544 382 MobiDBLite consensus disorder prediction 167 187 - -
Viun3g02544 382 MobiDBLite consensus disorder prediction 119 144 - -
Viun3g02544 382 Pfam bZIP transcription factor 335 379 IPR004827 GO:0003700|GO:0006355
Viun3g02544 382 SMART brlzneu 331 381 IPR004827 GO:0003700|GO:0006355
Viun3g02544 382 SUPERFAMILY Leucine zipper domain 335 379 IPR046347 GO:0003700|GO:0006355
Viun3g02544 382 Coils Coil 358 381 - -
Viun3g02544 382 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 30 378 IPR043452 GO:0003700|GO:0045893
Viun3g02544 382 MobiDBLite consensus disorder prediction 215 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g02544 Viun-Chr3 25016461 25019838 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g02544 16 378 bZIP Transcription Factor Family AT1G49720 46.410 1.34e-89 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Viun3g02544 bZIP_1 1.8e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g02544 K14432 - gmx:100776600 543.117