Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g02543 ATGAACTTCAGGAACTACGATGATAATAACCCCACTTGGGATGCCATGCATGGGAAGACACCGTCGGCAAATGTTGGTTCTCTGCTGAGACAGCCATCATCAGTATACTCCCTTACATTTGATGAGTTTCAGAGCACCATGGGTGGGGTTGGGAAGGAATTTGGGTCCATGAACATGGATGAACTCTTGAAGAACATTTGGACAGCTGAAGAGACTCAGGCCCTGGCATTTTCAGCTGGTATAGGAGAAGGCCACAACCTTAACTCAGTCAGTGGTGGTTTGCAAAGACAGGGTTCTTTGACATTGCCAAGGACTCTTAGTCAGAAAACAGTAGATGAGGTTTGGAGGGACTTGATCAAAGATAGTGGTGGGACCAATGATGGGAATGGCAATGGCAATGGCAATGGTGGTTCATCCATTCCTCAAAGGCAACCAACATTGGGAGAAATGACCTTAGAGGAGTTTTTGGTGAGAGCTGGGGTGGTGAGAGAAGATGTGCCTCAACAACAACAAATTGGAAAACCAAATAACAGTGGATGGTTTGGTAACTTTCCTAGACCAAACAATAACAATGGCCTACTTCTTGGTTTCCAACAACCTAATAGAAGTAATGGGAATATGGGTGAGAGGGTGGTGGAGACCAACAATAACTTAGCTCCCAAACAACCTCCTCCTTTACCTCTAAACTCAAACCACTCTCACCGACCGACACAACATCCACCACCACTTTTTCCAAAGCCTGCAAATGTAGCTTTTGCTGCTCCTATGCATTTGTTGAATAGTGCTCCACTTGCTAGCCCTGGCAGAAGAGGAGGGTTGATTGAGCATTCATTGAATGTTGGAATGGTTGGTTTAGCCTCGGGTAATCCAGAGGCTTCTCCCTCAAGGAAAATATCATCAGATGTAATTACAAGAACTAATGTAGACAACTCTTCACTGTCTCCAGTTCCTTATGCAATCAACAGGGGAAGAAAATGCAGCGCTATAGAGAAAGTGGTTGAGAGAAGACAAAGGAGAATGATAAAAAATAGAGAATCAGCTGCCAGGTCACGGGCTCGTAAGCAGGCCTACACTTTCGAACTGGAAGCTGAAGTTGCAAAACTTAAGGAAATAAACAGAGAATTGCAAAAAAAACAGGCAGAAATTAAGGAAATGCAGAAGAACAAGGATTCGGACCCTGCATGCCAGCCAAGGATAAGTAAAATACAATGCTTGAGAAGGACACTGACAGGACCATGGTAG 1242 0.4444 MNFRNYDDNNPTWDAMHGKTPSANVGSLLRQPSSVYSLTFDEFQSTMGGVGKEFGSMNMDELLKNIWTAEETQALAFSAGIGEGHNLNSVSGGLQRQGSLTLPRTLSQKTVDEVWRDLIKDSGGTNDGNGNGNGNGGSSIPQRQPTLGEMTLEEFLVRAGVVREDVPQQQQIGKPNNSGWFGNFPRPNNNNGLLLGFQQPNRSNGNMGERVVETNNNLAPKQPPPLPLNSNHSHRPTQHPPPLFPKPANVAFAAPMHLLNSAPLASPGRRGGLIEHSLNVGMVGLASGNPEASPSRKISSDVITRTNVDNSSLSPVPYAINRGRKCSAIEKVVERRQRRMIKNRESAARSRARKQAYTFELEAEVAKLKEINRELQKKQAEIKEMQKNKDSDPACQPRISKIQCLRRTLTGPW 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g02543 413 SMART brlzneu 331 395 IPR004827 GO:0003700|GO:0006355
Viun3g02543 413 MobiDBLite consensus disorder prediction 124 144 - -
Viun3g02543 413 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 30 413 IPR043452 GO:0003700|GO:0045893
Viun3g02543 413 SUPERFAMILY Leucine zipper domain 335 383 IPR046347 GO:0003700|GO:0006355
Viun3g02543 413 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 338 353 IPR004827 GO:0003700|GO:0006355
Viun3g02543 413 MobiDBLite consensus disorder prediction 169 187 - -
Viun3g02543 413 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 5 333 390 - -
Viun3g02543 413 MobiDBLite consensus disorder prediction 167 187 - -
Viun3g02543 413 Coils Coil 358 388 - -
Viun3g02543 413 MobiDBLite consensus disorder prediction 119 144 - -
Viun3g02543 413 Pfam bZIP transcription factor 335 388 IPR004827 GO:0003700|GO:0006355
Viun3g02543 413 CDD bZIP_plant_BZIP46 335 389 - -
Viun3g02543 413 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 333 384 IPR004827 GO:0003700|GO:0006355
Viun3g02543 413 Gene3D - 333 391 - -
Viun3g02543 413 MobiDBLite consensus disorder prediction 215 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g02543 Viun-Chr3 25016461 25019838 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g02543 16 413 bZIP Transcription Factor Family AT1G49720 46.714 2.95e-102 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Viun3g02543 bZIP_1 6.3e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g02543 K14432 - gmx:100776600 605.905