Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g02517 ATGGTGGTGAGTGGACACCAAGAACTGCTGCTGAAATATCTTCACGTCCCAACAAAACCAAACTTCCCATCAGTGAAGAAATTTATTACCTACTCCTACCTTCCATCACTTCCTTCTAAACCATGTAACCCTCTTCCCTTTTCTTCTCACAAACTAAAACCTTTACACTCTTCTACCACCATGGATAATTCAGCCTCTACAGACAGTGAAGTAGCCTATGATATCCCTCCAATCCTCAAAGTCTACAAAAACGGTCGTGTAGAGAGGCTAGAGGGTGTCCAGGTTCTTCCCCCGGGGCTTCATCCTGAAACCAACGTAGAATCCAAAGATGTCATAATCTCCGAACAACATGGTATATCCGCGAGGTTTTACATTCCCAAAACCACTTACCCTCCGCCCCAAAAGCTCCCTCTCCTTGTTTACTTCCACGGCGGCGCCTTCATAATCGAAACACCGTTTTCTCCCAACTACCATAACCTCCTAAACAAAGTTGTTTCAGAGGCTAATGTCATAGGCGTCTCTGTCCACTACAGGAGAGCACCGGAGCATCCGGTTCCCGTTGCCCACGAAGATTCGTGGGCTGCTCTCAAATGGGTCGCTTCCCATGCTGGTGGGGACGGCCCTGAGGAGTGGCTGAAGGAGCACGCAGATTTTGGGAAAGTGTTCTTCGCCGGTGACAGTGCCGGAGCCAACATCGCAAGCTATTTGGGCATTCGGGTTGGGACGGAAGGGTTACCTGGGGTGAAGGTTGTAGGGATTGCTTTGGTGCATCCTTATTTCTGGGGAGTTGAACCGCTTGAGTGTGAGGCGAAGCGGCCTGAAGACGCTGCGAAGGTGCCACAGTTGTGGCGTTTTTCATGCCCAACTACGAGTGGATCGGATGACCCGATTATCAACCCGAGCAAGGATCCGAATCTGGGAAAGCTTGGTTGTGAGAGGGTGCTTGTTTGTGTGGCTGAGAAGGATTTGCTGAAGGACAGGGGTTGGTACTACAAAGAAACGCTCGATAAGAGCGCGTGGTCTGGAGTTGTGGAGGTGGTGGAGACAAAGGACGAGAACCATGTTTTTCATCTGTTGGATCCAAGCTGCGAGAATGCTAAGGTTCTCCTTAACCGAATTATTTCCTTTATTAAACAGAATTGA 1143 0.4934 MVVSGHQELLLKYLHVPTKPNFPSVKKFITYSYLPSLPSKPCNPLPFSSHKLKPLHSSTTMDNSASTDSEVAYDIPPILKVYKNGRVERLEGVQVLPPGLHPETNVESKDVIISEQHGISARFYIPKTTYPPPQKLPLLVYFHGGAFIIETPFSPNYHNLLNKVVSEANVIGVSVHYRRAPEHPVPVAHEDSWAALKWVASHAGGDGPEEWLKEHADFGKVFFAGDSAGANIASYLGIRVGTEGLPGVKVVGIALVHPYFWGVEPLECEAKRPEDAAKVPQLWRFSCPTTSGSDDPIINPSKDPNLGKLGCERVLVCVAEKDLLKDRGWYYKETLDKSAWSGVVEVVETKDENHVFHLLDPSCENAKVLLNRIISFIKQN 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g02517 380 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 221 233 IPR033140 -
Viun3g02517 380 PANTHER ARYLACETAMIDE DEACETYLASE 75 363 - -
Viun3g02517 380 Pfam alpha/beta hydrolase fold 139 357 IPR013094 GO:0016787
Viun3g02517 380 Gene3D alpha/beta hydrolase 83 380 IPR029058 -
Viun3g02517 380 SUPERFAMILY alpha/beta-Hydrolases 78 379 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g02517 Viun-Chr3 24452244 24453488 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g02517 68 380 Carbohydrate Esterase AT3G48700 48.936 1.05e-102 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g02517 - - gmx:100815625 601.668