Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g02516 ATGGATTCCACCTCTAGCGAAGTAGCCCTCGATTTATCACCCTTTCTCAAAATCTACAAAGACGGTCACGCCGAGAGGATTTCCGGGTGCGAAGTCGTGCCGCCGGGCGCCGATTCCGCAACAAATGTCATATCCAATGACGTTGTAATCTCAAAAGACGACGACGTATCAGCCAGGATCTTCACTCCCAAACTAAGCGATCAAAGCGAAAAGCTTCCCCTCCTCGTCTACTTCCACGGTGGAGGGTTCTGCATAGAAACACCATTCTCTCCTCCTTACCACAAATTCCTCAACTCAGTTGTTTCCAAGGCCCACATCGTTGCCGTGTCTGTTCACTACCGAAGAGCCCCTGAACACCCCGTTCCCATTGCCTATGAAGATTCATGGACCTCGCTCCAATGGGTGGCCTCCCATTTGAACGGAAACGGCCCTGTGGAGTCCCTCAATCGCCACGCTGATTTCGGGAATGTGTTCTTCGCTGGGGACAGTGCGGGAGCAAACATCGCACACCACATGGCTCTACGGGTCGGGATCCACGGTCTTCCGGGTATCAACCTCCAAGGGATTGTGCTGGTGCATCCTTACTTTTGGGGCGCGGAGAGAATCGGTTCTGAGGTCCAAAAGCTGGACAAAGTTTCCGTGGTGGATGGTTTGTGGAGTTTCACTTGCCCTGCCTCTACAGGATCCGACGACCCGTTGCTGAACCCGGCTAAGGATCCGAATCTGGGGAAGCTGGCCTCGAAAAGAGTGCTGATTTGCGTTGCGGAGAACGATTTGCTGAAGGATCGAGGTTGGTATTACAAGGAGTTGGTGGAGAAGAGTGAGTGGCAAGGTGTTGCTGAGGTGATGGAGGCAAAAGGAGAAGATCACGTCTTTCATTTGTTCGATCCAGATTGTGACAGCGCTGTCTCCTTGCTCCATCGAATTGCTTCTTTCATCAACAACAGTTGA 951 0.5216 MDSTSSEVALDLSPFLKIYKDGHAERISGCEVVPPGADSATNVISNDVVISKDDDVSARIFTPKLSDQSEKLPLLVYFHGGGFCIETPFSPPYHKFLNSVVSKAHIVAVSVHYRRAPEHPVPIAYEDSWTSLQWVASHLNGNGPVESLNRHADFGNVFFAGDSAGANIAHHMALRVGIHGLPGINLQGIVLVHPYFWGAERIGSEVQKLDKVSVVDGLWSFTCPASTGSDDPLLNPAKDPNLGKLASKRVLICVAENDLLKDRGWYYKELVEKSEWQGVAEVMEAKGEDHVFHLFDPDCDSAVSLLHRIASFINNS 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g02516 316 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 157 169 IPR033140 -
Viun3g02516 316 SUPERFAMILY alpha/beta-Hydrolases 40 315 IPR029058 -
Viun3g02516 316 Gene3D alpha/beta hydrolase 18 315 IPR029058 -
Viun3g02516 316 PANTHER ARYLACETAMIDE DEACETYLASE 13 297 - -
Viun3g02516 316 Pfam alpha/beta hydrolase fold 75 293 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g02516 Viun-Chr3 24414752 24416012 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g02516 6 314 Carbohydrate Esterase AT3G48690 49.216 2.02e-102 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g02516 - - gmx:100801816 509.605