Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g02498 ATGACTTGTAGAGTTGTCGTAACATTCTTGTTTTTCCTTGTTACCTTGGTTCCACTTGTTCATATGCTTCCCTATGGTAGAAACCAGCTTGACATCAATTTCTACGACAGCTCGTGCCCTAATTTGCTCATGATTGTTAGATATGGTGTTTGGTCAGCCTTGAAAGGTGACAGCAGAATGGCCGCGTCCCTTCTTCGGTTACACTTTCACGATTGCATAGTAAATGGTTGTGATGCTTCGGTGCTTCTTGATGATACACCATATTTCACTGGTGAAAAGAATGCTCTTCCTAATCACAATTCACTTCGGGGGTTCGAAGTCATTGATGACATAAAACAACATGTTGAAAGACTGTGTCCATACACAGTCTCCTGCGCTGATATATTAGCATTAGCAGCCAGGGAAGCTATTGATATGGTTGGAGGACCTTCTTGGCCTGTTGCATTAGGCCGAAGAGATGCAACAACAACCAGTAAGGAGGCTGCTGAGCAACAAATTCCCTCACCAATTGAGTCTCTTGAAAATATCACTGCTAAGTTTTACTCCAAGGGTCTTGACTTGAGGGATGTTGTAGCCCTTTCAGGAGGACATACAATTGGTTTTGCTCAATGCTTCACCTTCAAAGGGAGACTTTTTGACTATCAAGGCTCTGGCAGACCTGATCCCGTGCTTGACTCTTCACTTCTCACAAGGTTGCAAAGCATGTGCCCAAATGAAGACATTTCAAACAGCAATCTAGCACCTCTTGATGCTACAAGCTCCTCCACGTTCGACAATGAGTACTATAGAAATCTCATATACAACACAGGCCTTCTACAGTCTGACCAAGCACTAACTAGGGATCGAAGAACTGCTGCTATGGTTTATTATTACAGCAACAACCGTTTCTCCTTCTACAATGATTTTGCCCAATCCATGGTGAGGCTTAGTAATGCAGGAGTTCTCACAGGAATAATGGGAGAAATTAGACAGAAATGTGGCTCTGTAAACTAA 993 0.43 MTCRVVVTFLFFLVTLVPLVHMLPYGRNQLDINFYDSSCPNLLMIVRYGVWSALKGDSRMAASLLRLHFHDCIVNGCDASVLLDDTPYFTGEKNALPNHNSLRGFEVIDDIKQHVERLCPYTVSCADILALAAREAIDMVGGPSWPVALGRRDATTTSKEAAEQQIPSPIESLENITAKFYSKGLDLRDVVALSGGHTIGFAQCFTFKGRLFDYQGSGRPDPVLDSSLLTRLQSMCPNEDISNSNLAPLDATSSSTFDNEYYRNLIYNTGLLQSDQALTRDRRTAAMVYYYSNNRFSFYNDFAQSMVRLSNAGVLTGIMGEIRQKCGSVN 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g02498 330 ProSiteProfiles Plant heme peroxidase family profile. 29 330 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun3g02498 330 Gene3D - 33 330 - -
Viun3g02498 330 PRINTS Plant peroxidase signature 103 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun3g02498 330 PRINTS Plant peroxidase signature 122 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun3g02498 330 PRINTS Plant peroxidase signature 248 263 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun3g02498 330 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun3g02498 330 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun3g02498 330 PRINTS Plant peroxidase signature 141 156 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun3g02498 330 PRINTS Plant peroxidase signature 188 200 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun3g02498 330 PRINTS Plant peroxidase signature 304 317 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun3g02498 330 PRINTS Plant peroxidase signature 264 281 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun3g02498 330 SUPERFAMILY Heme-dependent peroxidases 29 330 IPR010255 GO:0004601|GO:0006979|GO:0020037
Viun3g02498 330 CDD secretory_peroxidase 29 329 IPR033905 GO:0004601|GO:0042744
Viun3g02498 330 PANTHER PEROXIDASE 72-RELATED 27 328 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun3g02498 330 Pfam Peroxidase 50 294 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun3g02498 330 FunFam Peroxidase 33 179 - -
Viun3g02498 330 ProSitePatterns Peroxidases proximal heme-ligand signature. 189 199 IPR019793 -
Viun3g02498 330 FunFam Peroxidase 167 309 - -
Viun3g02498 330 PRINTS Haem peroxidase superfamily signature 123 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun3g02498 330 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun3g02498 330 PRINTS Haem peroxidase superfamily signature 250 265 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun3g02498 330 PRINTS Haem peroxidase superfamily signature 189 204 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun3g02498 330 PRINTS Haem peroxidase superfamily signature 141 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun3g02498 330 Gene3D Peroxidase, domain 2 167 309 - -
Viun3g02498 330 ProSitePatterns Peroxidases active site signature. 61 72 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g02498 Viun-Chr3 23978864 23982000 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g02498 28 327 Peroxidase AT1G49570 62.583 4.66e-135 386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g02498 K00430 - gmx:100812961 541.962