Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g02471 ATGGTGATCGATGTTTGTGACAGTGATGACCTTTGGAAGAGAGAAGAGGGGATAGATGTTAGAAAGATGATGGAGCATAAAAGGAGTCCCTGCTCTGTTGACCAAAGCAGTTATACTTCTATTGCATCTAAAAGGCAAAAGGCTGATTTATCTATCAGCACTAAGGAGAGGAAGGAGAAGATTGGGGAACGAATTGTTGCTCTTCAGCAGCTTGTTTCACCATATGGAAAGACAGATACATCTTCTGTTCTAAAGGAGGCAATGGAATACATAGGATTCCTTCATAAACAAGTTAAGGTTTGGCCATTCTTGCTACATTATGCTGAAATTATCACACTGCTCAGTGCTCCATACCTTGAAACTTCAGCAGCAGCCAAGATGCAGGGTATGGAGTCATGCAGCCTGAGGAGTAGAGGGTTATGCCTTGTTCCTGTGTCATTTACAATTGGAGTTGCTGAGAGCAATGGTGCAGATATCTGGGCTCCCATCAAAACTACTACTTCACCCAAATTGGAGAATGATGTCTCTCAATTTCATTGA 540 0.4222 MVIDVCDSDDLWKREEGIDVRKMMEHKRSPCSVDQSSYTSIASKRQKADLSISTKERKEKIGERIVALQQLVSPYGKTDTSSVLKEAMEYIGFLHKQVKVWPFLLHYAEIITLLSAPYLETSAAAKMQGMESCSLRSRGLCLVPVSFTIGVAESNGADIWAPIKTTTSPKLENDVSQFH 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g02471 179 SMART finulus 51 100 IPR011598 GO:0046983
Viun3g02471 179 Gene3D - 42 102 IPR036638 GO:0046983
Viun3g02471 179 FunFam Transcription factor bHLH113 family 44 133 - -
Viun3g02471 179 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 47 104 IPR036638 GO:0046983
Viun3g02471 179 CDD bHLH_AtbHLH_like 51 100 IPR045239 -
Viun3g02471 179 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 45 94 IPR011598 GO:0046983
Viun3g02471 179 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 38 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g02471 Viun-Chr3 23388760 23392677 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g02471 23 171 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G05710 56.962 1.18e-56 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g02471 - - vun:114178105 336.65