Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g02454 ATGGGAAAGAAAGGGAGTTGGTTTTCTGCAATCAAAAGGGTTTTCACTCACCACTCCAAGGGGAAGCAGGATGCGGATAACAAAGGCACAAAAGAAAAGAAGAAAAGTGTAGGAAAAGTAAAGCATGGAGAGACAAATTCATTCATCCCCCTCTTCAGAGAGCCAAGTAGTATTGAGAAAATCTTTGGGGACTTTGAAAGGGAGCAACAACTACTGGGGTTAAGGCCAGTCACTCCTCCTGAGAGACCCAAAACTCCACCATATGTCCCTCCAAGAGCACCTTCTCCTAGGCCTCCTTCTCCAAGGCCTCCATCTCCAAGGGCTGCTTCTCCCAGGGCTTCTTCCCCGCGAGTTACCTCTCCCAAAGCTGCATCTTTCCGGAATTCTCATCACCACAAGGAGGTTGTCTACAGACCAGAACCAACTTTGAGGCATCAGAATGCCTCAGCTACTAAGATCCAGGCTGTTTACAGAGGTTATATGGCAAGGAGGAGTTTTAGAGCACTGAAGGGTCTGGTGAGGCTCCAAGGAGTAGTGAGAGGACAGAATGTGAAGAGACAGACAGTAAACGCGATGAAACACATGCAACTGTTAGTGCGAGTTCAATCTCAGATTCAGTCTCGAAGGATCCAGATGTTGGAAAACCAGGCACGATATCAAGCTGAGTTCAAGAATGATAAGGATGCAGCCAGTATCTTGGGCAAACTCACTTCTGAAGCAGGTAATGAAGAGTGGGATGATAGCTTACTGACCAAAGAGGAAGTAGAGGCAAGGTTGCAGAGGAAGGTAGAAGCAATCATCAAAAGAGAAAGAGCAATGGCATTTGCATATTCACATCAGCTATGGAAAGCAACTCCAAAATCAACTCACACCCCAGTGGTAGATGGAAGATCAGGTGGACTTCCTTGGTGGTGGAACTGGTTGGAAAGACAAGCACCTGCAGCAGCAGCAGCAACTCCACAAGAAAAACTAGTGCTGAAGAATTTTCAACTCACACCTCCAAGACCATACTCAGAGCAAAAAACCAGTCCAAGACCCGGGTCCAGCTCTCAAAGACCACAACAGCCTCATTTTGCTTTTGATAACATGGACACTCCCACACCAAAGTCCACAAAATCAACCATAGTCACATCTTCAAAACCGGTACGAACACCGCCATATAGAACTCCTCAGGCAAACTCTTCAGGCTCTGGCTCTAAATTTGTGAGACCAAGGGGTGTGGGATCCAATTCACCCTTTGATGTGCCACTGAAGGATGATGAGAGTCTCACAAGCTGCCCCCCATTTTCAGTGCCAAACTACATGGCTCCAACCCTCTCTGCCAAGGCCAAAGTACGTGCTAGTAGTAATCCTAGAGAAAGGCTTGGTGGAACTCCAACAAGTACTGATTCTAAGAGAAGACTCTCATTCCCATTGTCACAAGGAATAGGGTCTTTCAAGTGGTCTAAAGGGTTCTCTAGCAAGGATCAAAGGGTGCCAGATAAGTTTCAGACACTTGAATCTATAGGAAACGTGAGTGTGGATTCAACACTGTCTTTGCCCGCAAGGGTGGGAAGAAAGCCTTTTACAAGATTTGTGTGA 1581 0.4662 MGKKGSWFSAIKRVFTHHSKGKQDADNKGTKEKKKSVGKVKHGETNSFIPLFREPSSIEKIFGDFEREQQLLGLRPVTPPERPKTPPYVPPRAPSPRPPSPRPPSPRAASPRASSPRVTSPKAASFRNSHHHKEVVYRPEPTLRHQNASATKIQAVYRGYMARRSFRALKGLVRLQGVVRGQNVKRQTVNAMKHMQLLVRVQSQIQSRRIQMLENQARYQAEFKNDKDAASILGKLTSEAGNEEWDDSLLTKEEVEARLQRKVEAIIKRERAMAFAYSHQLWKATPKSTHTPVVDGRSGGLPWWWNWLERQAPAAAAATPQEKLVLKNFQLTPPRPYSEQKTSPRPGSSSQRPQQPHFAFDNMDTPTPKSTKSTIVTSSKPVRTPPYRTPQANSSGSGSKFVRPRGVGSNSPFDVPLKDDESLTSCPPFSVPNYMAPTLSAKAKVRASSNPRERLGGTPTSTDSKRRLSFPLSQGIGSFKWSKGFSSKDQRVPDKFQTLESIGNVSVDSTLSLPARVGRKPFTRFV 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g02454 526 SMART iq_5 145 167 IPR000048 GO:0005515
Viun3g02454 526 MobiDBLite consensus disorder prediction 333 400 - -
Viun3g02454 526 MobiDBLite consensus disorder prediction 453 468 - -
Viun3g02454 526 Gene3D - 144 198 - -
Viun3g02454 526 MobiDBLite consensus disorder prediction 14 53 - -
Viun3g02454 526 MobiDBLite consensus disorder prediction 330 419 - -
Viun3g02454 526 MobiDBLite consensus disorder prediction 70 143 - -
Viun3g02454 526 PANTHER IQ-DOMAIN 5-RELATED 1 473 - -
Viun3g02454 526 ProSiteProfiles IQ motif profile. 146 174 IPR000048 GO:0005515
Viun3g02454 526 MobiDBLite consensus disorder prediction 79 110 - -
Viun3g02454 526 Pfam IQ calmodulin-binding motif 148 167 IPR000048 GO:0005515
Viun3g02454 526 MobiDBLite consensus disorder prediction 445 468 - -
Viun3g02454 526 Pfam Protein of unknown function (DUF4005) 408 478 IPR025064 -
Viun3g02454 526 MobiDBLite consensus disorder prediction 17 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g02454 Viun-Chr3 23210889 23216003 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g02454 1 525 IQD Protein Family AT3G59690 50.709 4.50e-164 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g02454 - - gmx:100814804 814.298