Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g02451 ATGGGAAAGAAAGGGAGTTGGTTTTCTGCAATCAAAAGGGTTTTCACTCACCACTCCAAGGGGAAGGATGCGGATAACAAAGGCACAAAAGAAAAGAAGAAAAGTGTAGGAAAAGTAAAGCATGGAGAGACAAATTCATTCATCCCCCTCTTCAGAGAGCCAAGTAGTATTGAGAAAATCTTTGGGGACTTTGAAAGGGAGCAACAACTACTGGGGTTAAGGCCAGTCACTCCTCCTGAGAGACCCAAAACTCCACCATATGTCCCTCCAAGAGCACCTTCTCCTAGGCCTCCTTCTCCAAGGCCTCCATCTCCAAGGGCTGCTTCTCCCAGGGCTTCTTCCCCGCGAGTTACCTCTCCCAAAGCTGCATCTTTCCGGAATTCTCATCACCACAAGGAGGTTGTCTACAGACCAGAACCAACTTTGAGGCATCAGAATGCCTCAGCTACTAAGATCCAGGCTGTTTACAGAGGTTATATGGCAAGGAGGAGTTTTAGAGCACTGAAGGGTCTGGTGAGGCTCCAAGGAGTAGTGAGAGGACAGAATGTGAAGAGACAGACAGTAAACGCGATGAAACACATGCAACTGTTAGTGCGAGTTCAATCTCAGATTCAGTCTCGAAGGATCCAGATGTTGGAAAACCAGGCACGATATCAAGCTGAGTTCAAGAATGATAAGGATGCAGCCAGTATCTTGGGCAAACTCACTTCTGAAGCAGGTAATGAAGAGTGGGATGATAGCTTACTGACCAAAGAGGAAGTAGAGGCAAGGTTGCAGAGGAAGGTAGAAGCAATCATCAAAAGAGAAAGAGCAATGGCATTTGCATATTCACATCAGCTATGGAAAGCAACTCCAAAATCAACTCACACCCCAGTGGTAGATGGAAGATCAGGTGGACTTCCTTGGTGGTGGAACTGGTTGGAAAGACAAGCACCTGCAGCAGCAGCAGCAACTCCACAAGAAAAACTAGTGCTGAAGAATTTTCAACTCACACCTCCAAGACCATACTCAGAGCAAAAAACCAGTCCAAGACCCGGGTCCAGCTCTCAAAGACCACAACAGCCTCATTTTGCTTTTGATAACATGGACACTCCCACACCAAAGTCCACAAAATCAACCATAGTCACATCTTCAAAACCGGTACGAACACCGCCATATAGAACTCCTCAGGCAAACTCTTCAGGCTCTGGCTCTAAATTTGTGAGACCAAGGGGTGTGGGATCCAATTCACCCTTTGATGTGCCACTGAAGGATGATGAGAGTCTCACAAGCTGCCCCCCATTTTCAGTGCCAAACTACATGGCTCCAACCCTCTCTGCCAAGGCCAAAGTACGTGCTAGTAGTAATCCTAGAGAAAGGCTTGGTGGAACTCCAACAAGTACTGATTCTAAGAGAAGACTCTCATTCCCATTGTCACAAGGAATAGGGTCTTTCAAGTGGTCTAAAGGGTTCTCTAGCAAGGATCAAAGGGTGCCAGATAAGTTTCAGACACTTGAATCTATAGGAAACGTGAGTGTGGATTCAACACTGTCTTTGCCCGCAAGGGTGGGAAGAAAGCCTTTTACAAGATTTGTGTGA 1578 0.4658 MGKKGSWFSAIKRVFTHHSKGKDADNKGTKEKKKSVGKVKHGETNSFIPLFREPSSIEKIFGDFEREQQLLGLRPVTPPERPKTPPYVPPRAPSPRPPSPRPPSPRAASPRASSPRVTSPKAASFRNSHHHKEVVYRPEPTLRHQNASATKIQAVYRGYMARRSFRALKGLVRLQGVVRGQNVKRQTVNAMKHMQLLVRVQSQIQSRRIQMLENQARYQAEFKNDKDAASILGKLTSEAGNEEWDDSLLTKEEVEARLQRKVEAIIKRERAMAFAYSHQLWKATPKSTHTPVVDGRSGGLPWWWNWLERQAPAAAAATPQEKLVLKNFQLTPPRPYSEQKTSPRPGSSSQRPQQPHFAFDNMDTPTPKSTKSTIVTSSKPVRTPPYRTPQANSSGSGSKFVRPRGVGSNSPFDVPLKDDESLTSCPPFSVPNYMAPTLSAKAKVRASSNPRERLGGTPTSTDSKRRLSFPLSQGIGSFKWSKGFSSKDQRVPDKFQTLESIGNVSVDSTLSLPARVGRKPFTRFV 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g02451 525 PANTHER IQ-DOMAIN 5-RELATED 1 472 - -
Viun3g02451 525 SMART iq_5 144 166 IPR000048 GO:0005515
Viun3g02451 525 MobiDBLite consensus disorder prediction 329 418 - -
Viun3g02451 525 MobiDBLite consensus disorder prediction 69 142 - -
Viun3g02451 525 Pfam IQ calmodulin-binding motif 147 166 IPR000048 GO:0005515
Viun3g02451 525 ProSiteProfiles IQ motif profile. 145 173 IPR000048 GO:0005515
Viun3g02451 525 Gene3D - 143 197 - -
Viun3g02451 525 MobiDBLite consensus disorder prediction 78 109 - -
Viun3g02451 525 MobiDBLite consensus disorder prediction 1 51 - -
Viun3g02451 525 MobiDBLite consensus disorder prediction 444 467 - -
Viun3g02451 525 MobiDBLite consensus disorder prediction 16 40 - -
Viun3g02451 525 Pfam Protein of unknown function (DUF4005) 407 477 IPR025064 -
Viun3g02451 525 MobiDBLite consensus disorder prediction 332 399 - -
Viun3g02451 525 MobiDBLite consensus disorder prediction 452 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g02451 Viun-Chr3 23210889 23216008 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g02451 1 524 IQD Protein Family AT3G59690 50.355 7.84e-163 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g02451 - - gmx:100807777 814.683