Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g02408 ATGCGGTGTCATGGCTTAACCGTACACGGAAGCAACCACCGTGGCTTCTGCGTCCCCACCGTGTCTCCGGTGTTCTTGAGACCCACCCGACCCGTCACCCGTATCGCGTTTCCCAAGGCTACCCTGAAGAACGAGGGACTAGTGATGGATTTGAGCTTCTACGAGCTTCTGGGTATACCCGAATCCGGTTCCTTGATGGAGATCAAGAACGCGTACAAACAACTCGCCCGAAAGTACCACCCGGACGTGTCTCCTCCGGGTCGGGTCGAGGAGTACACCAAACGGTTTATTCAGGTTCAGGAAGCCTACGAAACTCTCTCCGATCCTTCCCGAAGAGCCATGTACGATCACGACATGGCCAAAGGTATTAACTTCGCTTTCAACGCCCGCAGACGCCGCAATTACCACGATCAGGTGGTGGAGCAAAAAACTGAATGGAAATCTCGGTGGCAATCTCAACTGTCAGAGCTGAAGAGAAGAAGTAGCAGCAAGGATGGTGGAGGGAACATGTCATGGGCAGCTAGAATGCGCCAGCAGAGGGATGAATCGTCTAATGAATCATGA 564 0.5319 MRCHGLTVHGSNHRGFCVPTVSPVFLRPTRPVTRIAFPKATLKNEGLVMDLSFYELLGIPESGSLMEIKNAYKQLARKYHPDVSPPGRVEEYTKRFIQVQEAYETLSDPSRRAMYDHDMAKGINFAFNARRRRNYHDQVVEQKTEWKSRWQSQLSELKRRSSSKDGGGNMSWAARMRQQRDESSNES 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g02408 187 SUPERFAMILY Chaperone J-domain 51 123 IPR036869 -
Viun3g02408 187 MobiDBLite consensus disorder prediction 146 187 - -
Viun3g02408 187 FunFam Chaperone protein dnaJ 20, chloroplastic 40 148 - -
Viun3g02408 187 ProSiteProfiles dnaJ domain profile. 52 119 IPR001623 -
Viun3g02408 187 CDD DnaJ 53 108 IPR001623 -
Viun3g02408 187 PRINTS DnaJ domain signature 54 72 IPR001623 -
Viun3g02408 187 PRINTS DnaJ domain signature 72 87 IPR001623 -
Viun3g02408 187 PRINTS DnaJ domain signature 91 111 IPR001623 -
Viun3g02408 187 Pfam DnaJ domain 53 116 IPR001623 -
Viun3g02408 187 SMART dnaj_3 51 111 IPR001623 -
Viun3g02408 187 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 49 184 - -
Viun3g02408 187 ProSitePatterns Nt-dnaJ domain signature. 96 115 IPR018253 -
Viun3g02408 187 Gene3D DnaJ domain 42 163 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g02408 Viun-Chr3 22110877 22113605 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g02408 54 116 C2H2 Transcription Factor Family AT1G74250 45.455 8.55e-09 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g02408 - - gmx:100101903 320.472