Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g02389 ATGGGTTTCTGTAGCAATGGCAGAGAAGAGAGTGAAATGTATCACGCTCAAATCCACCTGTACAAACACGTGTACAACTTCGTGAGCTCTATGGCTCTCAAGTCCGCCATGGAACTAGGCATAGCCGACGCAATCCACAGCCACGGAGAACCCATCACCATTTCTGAGTTAGCCTCTGCACTCAAACTCCACCCCTCAAAACTCTCCGTTCTCCACCGATTCATGCGCCTTCTAACACATAATGGGTTCTTCGCCAAAACAACAGTGGGGTCACATAAAGGAGGAGGAGGAGAAGAAACACTCTATGATCTCACTCCTCCTTCCAAGCTTCTGATCCGAACCGAGTCAACGTGTTTGGCTCCTATTGTTAAGGGCGCGCTTCATTCGAGTTCCATCGATATGTGGCACTCCTCCGACAAGTGGTTCACTGAGGATAAGGAACTCTCGCTGTATGAGAGTGCCATGGGAGAGAGTTTCTGGGAGTTTTTGAACAAGGCCACTGAATCTGATACGCTTAACATGTTTCATGAAGCCATGGCAGCAGATTCTAGAATGTTCAAGATGGCTCTGGAAGAGTGCAAGCATGTGTTTGAGGGATTGAGTTCCCTTGTCGATGTGGGAGGTGGAACTGGTGCTGTCACGAGCATCATCCATGAACTCTTCCCTCACATGAAGTGTACGGTGTTTGATCAACCGCAGGTTGTGGCTAACTTGACTGGAACTGAAAATTTGAACTTTGTTGGTGGGGATATGTTCAAATCCATCCCTTCAGCTGATGCAGTTTTGCTCAAGTGGGTTCTGCATGATTGGAACGACGAGCTCGCAGTGAAGATATTGAAGAACTGCAAAGAAGCCATTTCAGGGAAAGGGAAAGGGAAAGTGATAATCATAGACATAGCAATAGATGAAGCAAGTGATGGTCGTGAATTGACAGAGTTGAAGCTCAACTATGACTTGGTGATGCTCACTATGTTGAATGGAAAAGAAAGAGAGAGAAAGGAATGGGAGAAACTTATTTATGATGCAGGCTTCAGCAGCTACGACATCACCCCCATATGTGGCTTCAAATCTCTCATCCAACTTTATCCTTAA 1092 0.4625 MGFCSNGREESEMYHAQIHLYKHVYNFVSSMALKSAMELGIADAIHSHGEPITISELASALKLHPSKLSVLHRFMRLLTHNGFFAKTTVGSHKGGGGEETLYDLTPPSKLLIRTESTCLAPIVKGALHSSSIDMWHSSDKWFTEDKELSLYESAMGESFWEFLNKATESDTLNMFHEAMAADSRMFKMALEECKHVFEGLSSLVDVGGGTGAVTSIIHELFPHMKCTVFDQPQVVANLTGTENLNFVGGDMFKSIPSADAVLLKWVLHDWNDELAVKILKNCKEAISGKGKGKVIIIDIAIDEASDGRELTELKLNYDLVMLTMLNGKERERKEWEKLIYDAGFSSYDITPICGFKSLIQLYP 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g02389 363 PIRSF O-mtase 4 363 IPR016461 GO:0008168
Viun3g02389 363 FunFam O-methyltransferase ZRP4 114 363 - -
Viun3g02389 363 Pfam O-methyltransferase domain 135 345 IPR001077 GO:0008171
Viun3g02389 363 Gene3D Vaccinia Virus protein VP39 113 363 IPR029063 -
Viun3g02389 363 CDD AdoMet_MTases 203 291 - -
Viun3g02389 363 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 117 359 IPR029063 -
Viun3g02389 363 SUPERFAMILY "Winged helix" DNA-binding domain 10 115 IPR036390 -
Viun3g02389 363 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 363 IPR016461 GO:0008168
Viun3g02389 363 Pfam Dimerisation domain 31 79 IPR012967 GO:0046983
Viun3g02389 363 PANTHER O-METHYLTRANSFERASE 12 346 IPR016461 GO:0008168
Viun3g02389 363 FunFam Coniferyl alcohol 9-O-methyltransferase 4 111 - -
Viun3g02389 363 Gene3D - 3 111 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g02389 Viun-Chr3 21821236 21824517 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g02389 28 350 Monolignol Biosynthesis Gene Families AT5G54160 34.337 4.53e-46 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g02389 K22588 - gmx:100807589 597.816