Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g02388 ATGTTGCTCGAAATTACAATTGGTTTGTTGGTGCTGGCTTTGTTTTTGCACTTGCGTCCCACACCCACTGCTAAATCAAAGGCCCTTCGCCACCTTCCAAACCCTCCTAGTCCAAAACCTCGTCTTCCATTCATTGGTCACCTTCACCTTCTAAAAGACAAACTTCTCCACTATGCCCTCATAGATTTATCCAAAACCTATGGCCCTTTGTACTCTCTCTACTTTGGGTCTATGCCAACCGTTGTTGCCTCCTCCCCTGAGTTGTTCAAACTCTTCCTTCAAACCCACGAGGCTGCTTCCTTCAACACAAGGTTCCAAACCTCTGCCATTAGGCGCCTCACTTATGACAACTCAGTGGCCATGGTTCCCTTTGGACCTTACTGGAAGTTCATCAGGAAGCTCATCATGAACGACCTCCTCAACGCCACCACCGTCAACAAGTTGAGGCCCCTCAGGACCCAACAGATCCGCAAGTTCCTCAAGGTCATGGCCCAAAGCGCACAGGCTCAGCAGCCCCTTAACGTCACCGAGGAGCTTCTCAAGTGGACCAACAGCACTATCTCCATGATGATGTTGGGTGAGGCTGAAGAGATTAGAGATATCGCTCGTGAGGTGCTTAAGATTTTCGGGGAGTACAGTCTCACTGACTTCATCTGGCCCTTGAAGAAGCTTAAGTTTGGACAGTACGAGAAGAGGATCGATGAAATATTCAACAAGTTCGACCCTGTCATCGAGAGGGTTATTAAGAAGCGCCGAGAGATCATGAGAAGGAGAAAGAACGGAGAAGCCGTTGAGGAAGAGCAGAGCGGAGTCTTCCTCGACACTTTGCTTCAATTCGCTGAGGACGAGACCATGGAGATCAAAATTACCAAGGAGCAGATCAAGGGTCTTGTTGTCGACTTCTTCTCAGCAGGAACAGATTCCACAGCCGTGGCAACTGAGTGGGCTTTGGCAGAGCTGATCAACAACCCTAGGGTGTTGCAGAAGGCTCGGGAGGAGGTGTACAGTGTTGTGGGGAAAGATAGACTGGTTGATGAAGTTGATACTCAAAACCTTCCTTACATCAGGGCGATTGTGAAGGAGACATTCCGCATGCACCCACCACTCCCAGTGGTGAAGAGAAAGTGTGTGGAGGAGTGTGAGATTGAGGGGTATGTGATCCCAGAGGGAGCATTGATACTTTTCAATGTGTGGGCTGTAGGAAGAGACCCTAAATACTGGGACAGACCATTGGAGTTTCGTCCTGAGAGATTCCTAGAAACTGGAGCTGAAGGAGAAGCTGGGCCTCTTGATCTTAGGGGCCAACATTTCACTCTTCTCCCATTTGGGTCAGGTAGAAGAATGTGCCCTGGAGTGAATTTGGCTACTTCAGGTATGGCAACACTTCTTGCATCTGTTATCCAGTGCTTTGACCTTCAAGTGGTGGGCCCACAAGGACAAATATTGAAAGGCAATGACGCCAAAGTGAGCATGGAAGAGAGAGCTGGACTCACGGTTCCGAGGGCACATAATCTGGAGTGTGTTCCAGTTGCAAGGACAAGCGTTGCAGCTAAACTCCTTTCCTAG 1566 0.4923 MLLEITIGLLVLALFLHLRPTPTAKSKALRHLPNPPSPKPRLPFIGHLHLLKDKLLHYALIDLSKTYGPLYSLYFGSMPTVVASSPELFKLFLQTHEAASFNTRFQTSAIRRLTYDNSVAMVPFGPYWKFIRKLIMNDLLNATTVNKLRPLRTQQIRKFLKVMAQSAQAQQPLNVTEELLKWTNSTISMMMLGEAEEIRDIAREVLKIFGEYSLTDFIWPLKKLKFGQYEKRIDEIFNKFDPVIERVIKKRREIMRRRKNGEAVEEEQSGVFLDTLLQFAEDETMEIKITKEQIKGLVVDFFSAGTDSTAVATEWALAELINNPRVLQKAREEVYSVVGKDRLVDEVDTQNLPYIRAIVKETFRMHPPLPVVKRKCVEECEIEGYVIPEGALILFNVWAVGRDPKYWDRPLEFRPERFLETGAEGEAGPLDLRGQHFTLLPFGSGRRMCPGVNLATSGMATLLASVIQCFDLQVVGPQGQILKGNDAKVSMEERAGLTVPRAHNLECVPVARTSVAAKLLS 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g02388 521 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 442 451 IPR017972 GO:0005506|GO:0016705
Viun3g02388 521 Pfam Cytochrome P450 36 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g02388 521 PRINTS P450 superfamily signature 449 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g02388 521 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g02388 521 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g02388 521 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g02388 521 CDD CYP93 68 509 - -
Viun3g02388 521 Gene3D Cytochrome P450 24 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g02388 521 SUPERFAMILY Cytochrome P450 30 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g02388 521 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g02388 521 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g02388 521 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g02388 521 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g02388 521 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g02388 521 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g02388 521 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g02388 521 PANTHER STEROID 21-HYDROXYLASE-RELATED 14 502 - -
Viun3g02388 521 FunFam Cytochrome P450 family protein 26 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g02388 Viun-Chr3 21774553 21776753 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g02388 32 517 Cytochrome P450 AT5G06900 36.217 3.76e-107 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g02388 - - gmx:100037450 925.235