Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g02384 ATGTTGCTCGAAATCGCAATTGGGTTGTTGGTGCTGGGTCTGTTTCTGCACCTGCGTCCCACACCGAGCGCAAAATCGAAGGCACTTCGCCACCTTCCCAACCCTCCAAGCCCAAAGCCTCGGCTTCCGTTGATTGGACACCTTCACCTTTTGAAAGACCAACTTCTACACCACTCTCTCATAGATTTATCCAAACGTTATGGCCCTTTGTACTCTCTCTACTTTGGGTCTATGCCCACCGTTGTTGCCTCCACCCCTGAGCTCTTCAAACTCTTCCTTCAAACCCACGAGGCTGCTTCCTTCAACACAAGGTTCCAAACCTCTGCCATTAAGCGCCTCACTTATGATAACTCCGTTGCCATGGTTCCCTTCGGTCCTTACTGGAAGTTCATCAGGAAGCTCATCATGAACGACCTCCTCAACGCCACCACCGTCAACAAGTTGAGGCCATTGAGGAGCCATGAGATCCGCAAGGTTCTCAGAGTTCTCGCCCAAAGTGCAGAGGCCCAACAACCTCTTAACGTCACTGAGGAGCTTCTCAAGTGGACCAACAACACCATCTCCATGCTCATGCTTGGTGAGGCCGAAGAGGTTAGAGATTTGGCTCGCGAGACGGTTAAGATTTTCGGAGAGTACAGTCTCACTGACTTCATCTGGCCCTTGAAGAAGCTCAAGTTTGGAAAGTACGAGAAGAGGATTGATGAGATATTCAACAAGTTCGACCCCGTCATTGAGAAGGTTATCAAGAAGCGCCAAGAGATCGTTAGAAGGAGAAAGAATGGAGAAGTTGTTGAGGGAGAGCAGAGCGGTATCTTCCTCGATACTTTGCTTGAATTCGCTGAGGACGAGACCATGGAGATCAAAATTACCAAGGAGCAGATCAAGGGTCTTGTTGTGGATTTCTTCTCAGCTGGGACAGATTCCACAGCCGTGGCTACTGAGTGGGCTTTGGCAGAACTTATCAACAACCCTAGGGTGTTGCAAAAGGCTCGGGAGGAAGTGTACAGTGTTGTGGGAAAAGATAGACTGGTTGATGAAGTTGATACTCAAAACCTTCCTTACATCAGGGCGATTGTGAAGGAGACATTCCGCATGCACCCACCACTCCCAGTGGTGAAGAGAAAGTGTGTGGAAGAGTGTGAGATTGAGGGGTGTGTTATCCCAGAGGGTGCATTGATACTTTTCAATGTGTGGGCTGTAGGAAGAGACCCTAAGTACTGGGACAGACCATCGGAATTTCGTCCCGAGAGATTCTTAGAAAATGGAGGTGAAGGGGCAGTTGGTCCTATTGATCTAAGGGGACAGCATTTTCAACTTCTCCCATTTGGGTCAGGTAGGAGAATGTGCCCTGGAGTGAATTTGTCTACTTCAGGAATGGCAACTCTTCTTGCATCTGTTATCCAGTGCTTTGACCTTCAAGTGCTTGACCCACAAGGACATGTACTCAAAGGTGATGATGCCAAAGTTAGCATGGAAGAGAGAGCTGGCCTCACTGTTCCAAGAAAACACAACCTCGTTTGTCTTCCACTTGCAAAAACAACCCTCGCTGCCAAACTCCTCTCCCCGTAG 1569 0.4888 MLLEIAIGLLVLGLFLHLRPTPSAKSKALRHLPNPPSPKPRLPLIGHLHLLKDQLLHHSLIDLSKRYGPLYSLYFGSMPTVVASTPELFKLFLQTHEAASFNTRFQTSAIKRLTYDNSVAMVPFGPYWKFIRKLIMNDLLNATTVNKLRPLRSHEIRKVLRVLAQSAEAQQPLNVTEELLKWTNNTISMLMLGEAEEVRDLARETVKIFGEYSLTDFIWPLKKLKFGKYEKRIDEIFNKFDPVIEKVIKKRQEIVRRRKNGEVVEGEQSGIFLDTLLEFAEDETMEIKITKEQIKGLVVDFFSAGTDSTAVATEWALAELINNPRVLQKAREEVYSVVGKDRLVDEVDTQNLPYIRAIVKETFRMHPPLPVVKRKCVEECEIEGCVIPEGALILFNVWAVGRDPKYWDRPSEFRPERFLENGGEGAVGPIDLRGQHFQLLPFGSGRRMCPGVNLSTSGMATLLASVIQCFDLQVLDPQGHVLKGDDAKVSMEERAGLTVPRKHNLVCLPLAKTTLAAKLLSP 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g02384 522 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 442 451 IPR017972 GO:0005506|GO:0016705
Viun3g02384 522 FunFam Cytochrome P450 family protein 26 507 - -
Viun3g02384 522 SUPERFAMILY Cytochrome P450 30 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g02384 522 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g02384 522 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g02384 522 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g02384 522 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g02384 522 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g02384 522 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g02384 522 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g02384 522 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g02384 522 CDD CYP93 68 509 - -
Viun3g02384 522 Pfam Cytochrome P450 36 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g02384 522 PANTHER STEROID 21-HYDROXYLASE-RELATED 26 502 - -
Viun3g02384 522 Gene3D Cytochrome P450 24 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g02384 522 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g02384 522 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g02384 522 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g02384 Viun-Chr3 21699944 21701897 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g02384 32 522 Cytochrome P450 AT5G06900 37.177 1.05e-107 329
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g02384 K23179 - gmx:100037450 895.575