Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g02380 ATGAAGAAGGTTCCCAAGAACAGCTGCAAGTCTGCATCGCACAGGCTCTTTAAGGACAAGGCGAAGAACCGTGTGGATGACCTGCAGGTTATGTTCCTCGATCTGCAGTTTGCTAGAAAGGAGAGTCGCACGGTTGATGCTGCAGTGCTTGAGGAGCAAGTTCATCAAATGCTTCGCGAGTGGAAGGCCGAGCTCAATGAGCCGTCGCCTGCGTCTTCGTTGCAGCAAGGTGGCAGTCTTGGGTCATTCTCCACCGATATCTGTCGGCTATTGCAGCTTTGTGATGAGGAAGATGATGCCTCTAGTCCGTTAGCTGCTCCTAAGCCTGAACCAAATGATCAGACACTACAGGCTGGGGGTAAGGTCGTGTTCCAAGAGGGCCAACAGCAACATGATTTCCCGTTGATTGATGAGTGCAAAAACTCCACCTCAATTCAAAATGCGGCAGCTAACAACCTAGATGGACATGCTTTAGAATATCATCAGTTTGATTTGCATCAGGACTATGATCATGGCTTTTACACTGGCTTTAATGGTACAGGTTATTGTGAGGAGGAGGCTATTCCTCATATATCTAGCTACCTACCAAGTATCTGCCCTCCTCCTTCTGCTTTCTTAGGCCCAAAATGTGCACTTTGGGACTGTCCAAGGCCTGCACAAGGGTTGGACTGGTGTCAAGACTACTGCAGCAGCTTTCATGCTGCCTTAGCTTTGAATGAAGGGCCACCAGGCATGGCCCCGGTTCTACGACCTGGGGGAATTGGTTTGAAGGATAATTTACTTTTTGCTGCCCTTAGTGCAAAGGCACAAGGAAAAGATGTTGGCATCCCAGAATGTGAGGGAGCAGCAACTGCAAAGTCTCCATGGAATGCGCCTGAGCTCTTTGATCTGTCTGTTCTTGAGGGTGAGACAATTAGGGAGTGGCTCTTCTTTGATAAGCCTCGTAGAGCATTTGAGAGTGGAAACAGAAAACAAAGGTCATTGCCAGATTATAGTGGACGTGGTTGGCATGAATCTAGAAAGCAAGTCATGAATGAGTTTGGAGGGCTGAAGAGATCCTATTATATGGATCCACAACCACTGAACCATTTTGAGTGGCACCTTTATGAATACGAGATTAGCAAGTGTGATGCATGTGCCTTGTACCGATTGGAACTGAAACTTGTTGATGGTAAGAAGAACTCCAAGACAAAGTTAGCTAATGATTCAGTTGCTGATCTGCAGAAGCAGATGGGAAGGCTCTCTGCTGAGTTTCCACATGACAACAAAAGGGCTGCCAAAGGCAGAGCCAAAGTTAATGCAAAAGTTGGCATCGGTGGTGTCTATTCAACTTCACATAGAGTGACCACACTGAATGGAGCGTACGAGTATGGGTTGGCTGCACCATATGAATATCTTGTTGAGAACATGGGCGACTACTATGGGACATGA 1431 0.4717 MKKVPKNSCKSASHRLFKDKAKNRVDDLQVMFLDLQFARKESRTVDAAVLEEQVHQMLREWKAELNEPSPASSLQQGGSLGSFSTDICRLLQLCDEEDDASSPLAAPKPEPNDQTLQAGGKVVFQEGQQQHDFPLIDECKNSTSIQNAAANNLDGHALEYHQFDLHQDYDHGFYTGFNGTGYCEEEAIPHISSYLPSICPPPSAFLGPKCALWDCPRPAQGLDWCQDYCSSFHAALALNEGPPGMAPVLRPGGIGLKDNLLFAALSAKAQGKDVGIPECEGAATAKSPWNAPELFDLSVLEGETIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMNEFGGLKRSYYMDPQPLNHFEWHLYEYEISKCDACALYRLELKLVDGKKNSKTKLANDSVADLQKQMGRLSAEFPHDNKRAAKGRAKVNAKVGIGGVYSTSHRVTTLNGAYEYGLAAPYEYLVENMGDYYGT 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g02380 476 PANTHER TRANSCRIPTION FACTOR VOZ1 1 471 IPR039277 GO:0006355|GO:0048578
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g02380 Viun-Chr3 21609415 21615146 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g02380 3 474 VOZ-9 Transcription Factor Family AT1G28520 72.449 0.0 709
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF VOZ Viun3g02380 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g02380 - - pvu:PHAVU_003G073700g 954.125