Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g02335 ATGAATTGCGACCCCGACCTCTACTTATTGAAGAGGCGCCCAAATAACTGTGTTTCTTCGGCCGTCGGCACTCTCAAAACGCAAGTCACAATGCCTAAGCAGATCCACGAGATTAAGGATTTCCTTCTGACGGCGCGGAGGAAGGATGCGAGGTCGGTGAAAATCAAGAGAAGCAGAGATGTGGTTAAGTTCAAGGTTCGATGTTCCAAGTATTTGTACACGCTTTGTGTCTTTGATCCTGAGAAAGCCGATAAATTGAAGCAATCTCTTCCTCCTGGTTTGAGTGTTCAAGACCTGTAA 300 0.4633 MNCDPDLYLLKRRPNNCVSSAVGTLKTQVTMPKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDPEKADKLKQSLPPGLSVQDL 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g02335 99 PANTHER 60S RIBOSOMAL PROTEIN L38 31 98 IPR002675 GO:0003735|GO:0005840|GO:0006412
Viun3g02335 99 FunFam 60S ribosomal protein L38 31 99 - -
Viun3g02335 99 Gene3D - 31 99 IPR038464 -
Viun3g02335 99 Pfam Ribosomal L38e protein family 32 98 IPR002675 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g02335 Viun-Chr3 20918009 20918791 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g02335 31 99 Cytoplasmic Ribosomal Protein Gene Family AT3G59540 94.203 2.06e-43 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g02335 K02923 - gmx:100305707 140.584