Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g02322 ATGGGTTTACCTTCTCTCCTTCTTGTTTTAACTCCTCTGCTGACATCATTTGCTGTTTCCCAACCTCAAGAGTTTGTGAGCATTGATTGTGGTGGATCAAGCAATTACACTGATAACAGCACGGGTTTGGCATGGATCTCAGACTCTGGGATCATGGAACATGGCATTTCAGTGGAAGTGCAAAGTCCAAATGGAAGCATGGTGCAATATCAGAAAAGGAGAGATTTTCCCATAGATACGAAGAAGTACTGTTACACACTGAGCACAGAGGAGAGAAGAAGGTACTTGGTGAGAGCAAGTTTTCAGTATGGAAGCTTGGAGAATGGAGACACTTACCCTCAGTTTCAGCTCTACTTGGATGCAACCAAGTGGGCTACTGTGTCAGTGTATGATGCCTCAAGAATTTATGTTAAGGAAATGATAATCAGGGCACCCTCAAATTCTATTGATGTCTGTGTGTGCTGTGCTACCACTGGTTCTCCCTTCATTTCCACTCTTGAGTTGCGACCCTTCAATCTTTCAATGTATGCCACGGATTTTGAAGACAATTTCTTCTTAGAAGTTGCTGCAAGAATCAATTTTGGTGCACCAACCGAAGATGCTGTCAGGTACCCGGATGATCCATATGATAGAATTTGGGATTCTGATCTCATTAGAAGGCAAAATTATCTTGTTGGGGTAGCCCCAGGCACGGAAAGGATTGGAACTACAAAGAACATTGATGTAGAAACAAGAGAATATCCACCTGTTAAAGTAATGCAAACTGCAGTTGTTGGCAGAAAAGGAGTACTCAGCTACAGATTGAACCTGGAAGACTTCCCTGCCAATGCTCGAGCTTATGCATATTTTGCAGAGATTGAAGATTTGGACAAGAATGAGAGTCGAAAATTCAAATTAAAGCAACCTTATATAGCTGACTATAGCAATGCAGTGGTGAATATTGCGGAGAATGCCAATGGGAGCTACACTTTATATGAACCAAGTTACATGAATGTTACTCTAGAATTTGTTTTATCATTCTCCTTTGTTATGACCCCAGATTCTACCCGAGGACCTCTTCTGAATGCACTGGAAATAAGCAAATATGTAGAGATTGCTTCAAAAACAGACAAACAAGACTCAACCGTGGTAAATGCATTTCGGTTATTGTCTGCTGAAAGTTCCCAGACAAATGAAGGTGACCCTTGTGTTCCAACTCCTTGGGAATGGGTGAATTGTAGTACCACCACAACGCCAAGAATTACAAAAATAATTCTTTCAAGAAGGAATGTGAAAGGTGAAATCCCACCTGAGCTTGGCAACATGGAAGCATTGACAGAGCTGTGGTTAGATGGCAACCTGCTTAGTGGACCGTTGCCTGACATGAGTAAACTCATAAATCTAAAGATCGTGCACTTAGAGAACAACAAGTTGTCTGGTCGATTACCGTCTTACCTTGGTAGTTTGCCAAGTTTACAAGCACTGTTCATACAGAACAACTCATTTAGCGGGGAAATACCAGCTGGATTAGTGTCTGAAAAAATTGTTTTCAGATTTGAAGGTAATCCTGGACTATACAGAGGGAACAAGAAGCATTTTAAGATGGTGGTGGGAATTTCAATTGGAGTACTAGTGATCTTGTTAATATTCTTCTTGGTAAGTTTGGTGCTGTTGCTCAATACGCGGAGAAAGGCATCTCAAAAGAAACGTGAGGAAAAAGGCATTTCTGGACGCACAAATAGTAAACCTTTAACTGGATACTCATTTCTTCGCGGTGGAAGTTTGATGGATGAAAATACTACTTGCCATATTACACTCTCAGAGTTGAAAGAAGCTACTGACAATTTTTCAGAGAAAATTGGCAAAGGAAGCTTTGGATCTGTTTACTATGGGAAAATGAGAGATGGAAAAGAAATTGCAGTTAAGAGCATGAGTGAATCATCCTGCCATGGGAACCAGCAATTTGTTAACGAGGTGTCCCTCTTATCCAGAATTCATCACAGAAATTTGGTTCCCTTGATTGGATATTGTGAAGAAGAATGTCAGCATATTCTGGTCTACGAGTATATGCACAATGGCACTTTACGGGATCACATTCATGAGAGTTCCAAGAAGAAGAACTTGGACTGGTTAGCTCGTCTTCGTATTGCAGAAGATGCAGCTAAAGGTCTTGAATACTTACACACAGGATGCAATCCTAGCATCATTCACCGTGATATAAAGACAGGTAACATTCTTTTAGACATAAATATGAGAGCAAAAGTATCAGACTTTGGACTCTCTAGACTAGCTGAAGAAGATTTAACCCATGTATCGAGCATTGCAAGAGGAACTGTTGGCTACTTGGATCCTGAGTACTATGCAAGCCAGCAATTGACAGAAAAGAGTGACGTATACAGTTTTGGAGTTGTTCTGCTGGAACTGATATCTGGAAAGAAACCTGTCTCATCAGAAGATTACGGTGCTGAAATGAACATTGTTCAATGGGCTAGATCATTAACTCGTAAAGGAGATGCAATGAGCATCATTGATCCTTCTCTGAATGGAAATGCTAAAAGTGAGTCGATTTGGAGGGTGGTTGAAATTGCCATGCAATGTGTGGAACACCATGGTTCCTCAAGGCCAAGGATGCAAGAAATCATTTTGGCCATACAAGATGCTATCAAGATAGAACAAGGAACAGAAAATAAGTTTAAATCATTATCATCATCATCATCATTTTCAGGTAGCAGCACTTCAAAGCCACACTCTTCACGCAAAACTTTACTCACAAACTTTCTTGAAATCGAGAGCCCTGACGTTTCAAATGGTTGCCTTCCATCAGCAAGATAA 2811 0.407 MGLPSLLLVLTPLLTSFAVSQPQEFVSIDCGGSSNYTDNSTGLAWISDSGIMEHGISVEVQSPNGSMVQYQKRRDFPIDTKKYCYTLSTEERRRYLVRASFQYGSLENGDTYPQFQLYLDATKWATVSVYDASRIYVKEMIIRAPSNSIDVCVCCATTGSPFISTLELRPFNLSMYATDFEDNFFLEVAARINFGAPTEDAVRYPDDPYDRIWDSDLIRRQNYLVGVAPGTERIGTTKNIDVETREYPPVKVMQTAVVGRKGVLSYRLNLEDFPANARAYAYFAEIEDLDKNESRKFKLKQPYIADYSNAVVNIAENANGSYTLYEPSYMNVTLEFVLSFSFVMTPDSTRGPLLNALEISKYVEIASKTDKQDSTVVNAFRLLSAESSQTNEGDPCVPTPWEWVNCSTTTTPRITKIILSRRNVKGEIPPELGNMEALTELWLDGNLLSGPLPDMSKLINLKIVHLENNKLSGRLPSYLGSLPSLQALFIQNNSFSGEIPAGLVSEKIVFRFEGNPGLYRGNKKHFKMVVGISIGVLVILLIFFLVSLVLLLNTRRKASQKKREEKGISGRTNSKPLTGYSFLRGGSLMDENTTCHITLSELKEATDNFSEKIGKGSFGSVYYGKMRDGKEIAVKSMSESSCHGNQQFVNEVSLLSRIHHRNLVPLIGYCEEECQHILVYEYMHNGTLRDHIHESSKKKNLDWLARLRIAEDAAKGLEYLHTGCNPSIIHRDIKTGNILLDINMRAKVSDFGLSRLAEEDLTHVSSIARGTVGYLDPEYYASQQLTEKSDVYSFGVVLLELISGKKPVSSEDYGAEMNIVQWARSLTRKGDAMSIIDPSLNGNAKSESIWRVVEIAMQCVEHHGSSRPRMQEIILAIQDAIKIEQGTENKFKSLSSSSSFSGSSTSKPHSSRKTLLTNFLEIESPDVSNGCLPSAR 936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g02322 936 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 407 499 - -
Viun3g02322 936 Gene3D Phosphorylase Kinase; domain 1 587 682 - -
Viun3g02322 936 SUPERFAMILY L domain-like 397 503 - -
Viun3g02322 936 PANTHER OS07G0107800 PROTEIN-RELATED 455 881 - -
Viun3g02322 936 FunFam serine/threonine-protein kinase PBS1-like 586 682 - -
Viun3g02322 936 CDD STKc_IRAK 613 874 - -
Viun3g02322 936 SUPERFAMILY Protein kinase-like (PK-like) 594 874 IPR011009 -
Viun3g02322 936 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 683 890 - -
Viun3g02322 936 SMART serkin_6 607 881 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun3g02322 936 ProSitePatterns Serine/Threonine protein kinases active-site signature. 728 740 IPR008271 GO:0004672|GO:0006468
Viun3g02322 936 ProSiteProfiles Protein kinase domain profile. 607 881 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun3g02322 936 Pfam Protein tyrosine and serine/threonine kinase 609 874 IPR001245 GO:0004672|GO:0006468
Viun3g02322 936 Gene3D Transferase(Phosphotransferase) domain 1 683 900 - -
Viun3g02322 936 ProSitePatterns Protein kinases ATP-binding region signature. 613 635 IPR017441 GO:0005524
Viun3g02322 936 Pfam Malectin-like domain 28 361 IPR024788 -
Viun3g02322 936 Gene3D Ribonuclease Inhibitor 368 510 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g02322 Viun-Chr3 20735703 20740724 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g02322 1 936 Receptor kinase-like Gene Family AT1G67720 67.021 0.0 1268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Viun3g02322 Malectin_like 1e-87 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g02322 - - vum:124840153 1756.5