Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g02320 ATGGAAAAAATGGAGTTAATATCGAGAGAAACCATCAAACCCTCGACACCAACTCCTCCACACCTCAAAATCTATCCACTCTGTTTCATCGACCACATCGTTTTCCGCAACTACATCCCAATACTTCTGTTCTACTCTGCAAACCACCATTCCAAGAACCACCAAGCTTCCAAAATCTCAACCCTCAAAAAATCCTTATCCCATGTTCTTTCACGATACTACCCCTTCGCGGGGAACCTCAGAGACCAACTTTCCATCGAATGCAACGACCAAGGTGTGTCCTTTCTCGTCACCACCTTCACATGCAACCTTTCATCGATCCTCCACAAGCCCAACCATCAAACGTTCCACCCTCTCTTCCCAGATCAACTACAGTGGAACCCCATGGAAACACCTTCTTCACCCATTCTAGCCATTCAGATAAACTGTTTCGCATGCGGAGGAATCGCCATAAGCGTCTGCATGTGTCACAAAGTTGCCGACGCCGCCACACTCTGCAACTTCATCAATGACTGGGCAACATTCACCCGCCATAGCCAAAACCAAGAACAAGAACAACCAGAGTTGTTGTCATCGTTACCCTTCCCAGTTCCCGGGGCTTCATTTTTTCCGCAAGAAAACTTGCCCGTTTTCCCGGAAGCCGCGTTCGTGAAAAACGACACCGTTTGTCGAAGGTTCGTGTTCGAGGCTGCTAAGATCGAGTCGCTCAAAGCCATGGTGTCCTCCTCCGGCAACGTGCAAAACCCCACGCGTGTGGAAGTTGTGAGCGCGTTGATCTACAAGCGCGCGGTTTCATCGCTAGGGTTAACTTTCGAAACGACGGCGTTCCGCACCGCCGTGAACCTCCGCAACAGAACGGTTCCTCCGCTTCCTGGGAAAAGCTTGGGGAACCTGGTGTGGTTCCTCTTCGTCACCAACCCGGGGGAAGAGGCGGAGCTGCAGGAGTTGGTGGCGAAAATGAAAGACGGGTTGAGCGAGTTCTGTGAGACGTGTGGGAAGAAGTTTGGAGGGAAGAAGAAGGATTTGCGGTTCATCACGGAGTGTCTGAAGCAGGCTACTAGCACTAGGGTTCCGGAGGGTGGGAGTTTGGTGTGTTGCGCGAGTTGGTGTAGGTTTCCGATGTACGAAGCGGATTTTGGGTGGGGGAAACCGTCGTGGGTCACCACTAGCGAGTGTCCGGTGAAGAATAGCGTTGTTTTGATGGATACGAGAGACGGTGAAGGGATCGAAGCGCTTGTGAACATGGAGGAGCATGACATGGCCAAGTTCGAGCGTGACATCCACCTTCTTCAATATGCTTCTCTTAATCCATTAGTTCAACATGGTAGCTAA 1332 0.5098 MEKMELISRETIKPSTPTPPHLKIYPLCFIDHIVFRNYIPILLFYSANHHSKNHQASKISTLKKSLSHVLSRYYPFAGNLRDQLSIECNDQGVSFLVTTFTCNLSSILHKPNHQTFHPLFPDQLQWNPMETPSSPILAIQINCFACGGIAISVCMCHKVADAATLCNFINDWATFTRHSQNQEQEQPELLSSLPFPVPGASFFPQENLPVFPEAAFVKNDTVCRRFVFEAAKIESLKAMVSSSGNVQNPTRVEVVSALIYKRAVSSLGLTFETTAFRTAVNLRNRTVPPLPGKSLGNLVWFLFVTNPGEEAELQELVAKMKDGLSEFCETCGKKFGGKKKDLRFITECLKQATSTRVPEGGSLVCCASWCRFPMYEADFGWGKPSWVTTSECPVKNSVVLMDTRDGEGIEALVNMEEHDMAKFERDIHLLQYASLNPLVQHGS 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g02320 443 Gene3D - 2 208 IPR023213 -
Viun3g02320 443 Gene3D - 219 434 IPR023213 -
Viun3g02320 443 Pfam Transferase family 3 428 - -
Viun3g02320 443 PANTHER F21J9.9 5 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g02320 Viun-Chr3 20670987 20672458 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g02320 3 425 Monolignol Biosynthesis Gene Families AT5G48930 25.214 5.83e-25 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g02320 - - vum:124841331 853.203