Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g02314 ATGGCCAATGAAGAAGGTAGTAGTAGCAACAACACCAACAGAACTATCTGTATGGAAAGATATGAAGTGGGTAAGGTCTTGGGCAAAGGAAAATTCTCAGTGGTGAAGCTTGCATGTAACGTTGTCACCGGAGACAAGGTAGCCATCAAAATTTTTGACAAAGAACAACTTCTCAAAGGAAGAAGCGGAAGGATCAAGAGTCTCGTTAAGAAAAAGATTAAACAAGAAATATCAATACAGAGCATGGTTAAACACCCGAATGTGTTGCGTGTAATTGAGAAGAAACTGTATCAGATATAA 300 0.3867 MANEEGSSSNNTNRTICMERYEVGKVLGKGKFSVVKLACNVVTGDKVAIKIFDKEQLLKGRSGRIKSLVKKKIKQEISIQSMVKHPNVLRVIEKKLYQI 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g02314 99 SUPERFAMILY Protein kinase-like (PK-like) 12 93 IPR011009 -
Viun3g02314 99 Gene3D Phosphorylase Kinase; domain 1 9 97 - -
Viun3g02314 99 ProSitePatterns Protein kinases ATP-binding region signature. 27 50 IPR017441 GO:0005524
Viun3g02314 99 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 7 93 - -
Viun3g02314 99 Pfam Protein kinase domain 21 93 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun3g02314 99 ProSiteProfiles Protein kinase domain profile. 21 99 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g02314 Viun-Chr3 20611516 20615170 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g02314 21 93 CBL-interacting serine-threonine protein kinases AT1G01140 43.836 1.81e-15 68.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Viun3g02314 Pkinase 1.4e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g02314 - - vun:114175131 189.119