Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g02313 ATGCTTGATCCCAATCCTGTTAGAAGGATCACAATTGATGATATGTATCAGGATCTGTGGTTCATCACGAATTACCAACCTCTTAGATTTTCCAAGGAATCTGTTAGTTTTGATTATGACTCACCAGATCTTCCAGCAGAGAAGGAAGAAAGAGGATCTTCATCAGAAGCACCAATCATGAATGCGTTTGAGATTTCTTCTACTTATCTGGGCTTCAACCTTATTGGAAATCTTTTCAGTAAGGTACATGTTAAGCTGGAAACTAGTTTCATATCCAAATCTCCCATCCTTGATATAGTTGGAGAAATTGAGTATAGAACAGCGAGATTAGGATTTGAAGTTCAGAGGAAGAACTATCAGATCAATATTAACAGTAAAGAGGAACTGGCTAGACGAAAAGGTCACCTATCTATAGTCACTAAGGTGTATGAGATGGTCTCTCCCTATTACATGGTTGTGGTTCGTAATGCTTCAGGAGATAATCTACAATTCCATGAGTTCTGCGAGCAATTATATGCTGAGCTGCGAAATATCATTTGGAAAACAGAACCTTTACAAAATGGATAA 567 0.3774 MLDPNPVRRITIDDMYQDLWFITNYQPLRFSKESVSFDYDSPDLPAEKEERGSSSEAPIMNAFEISSTYLGFNLIGNLFSKVHVKLETSFISKSPILDIVGEIEYRTARLGFEVQRKNYQININSKEELARRKGHLSIVTKVYEMVSPYYMVVVRNASGDNLQFHEFCEQLYAELRNIIWKTEPLQNG 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g02313 188 Gene3D Kinase associated domain 1, KA1 55 181 - -
Viun3g02313 188 CDD CIPK_C 61 171 - -
Viun3g02313 188 Pfam NAF domain 59 115 IPR004041 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g02313 Viun-Chr3 20607447 20610902 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g02313 1 182 CBL-interacting serine-threonine protein kinases AT1G30270 38.660 7.34e-36 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g02313 - - vun:114179860 380.178