Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g02261 ATGGATGACTTATCAGCACCCAAGAGCAAGATCCTGAAAAGTCCAGCACTTGCACAGTATATCCTTGAGACGAGTGCATATCCCAAAGAGCATGAGCAGTTGAAGCAACTCCGAGAGACAACAGTGCAGAAATATGGTTTCAAGAGTTTGATGAGTGTGGCTGTGGATGAAGCGCAATTCCTATCTGTTCTTCTAAAAATCATGAAGGCTCAGAAAACACTAGAAATTGGAGTTTTCACGGGTTACTCGCTCCTTTCTACGGCTCTAGCTCTTCCTCCTCATGCAAAGATAATAGCAATTGATGTGGATAGAGAAGCATACGAGACTGGATTACCCTTCATCCAGAAGGCAGGAGTGGAGGACAAAATTGACTTTATCCAAGCAGATGCATTATCGGCCCTACGTGATCTTGTTGAAGGAAACCATGGGGAGTCCTTTGACTTCGTATTTGTGGATGCTGACAAGGAAACTATGATAGAGTATCATGAGGTGTTGTTAAAATTGGTGAAGAAGGGTGGAACAATTGCATACGATAACACCTTATGGCTTGGTACAGTGGCTATGTCTGAGGATGAGAAAATGGAAGATAAGTTCTGGAAAAATAGGAAGCCTACTCTCGAATTCAACAGCTACATAGCAAATGATTGTCGCATAGAATCAACTATTGTTTCCATCGGAGACGGTTTAACTCTTTGTCGACGTATCTGA 708 0.4251 MDDLSAPKSKILKSPALAQYILETSAYPKEHEQLKQLRETTVQKYGFKSLMSVAVDEAQFLSVLLKIMKAQKTLEIGVFTGYSLLSTALALPPHAKIIAIDVDREAYETGLPFIQKAGVEDKIDFIQADALSALRDLVEGNHGESFDFVFVDADKETMIEYHEVLLKLVKKGGTIAYDNTLWLGTVAMSEDEKMEDKFWKNRKPTLEFNSYIANDCRIESTIVSIGDGLTLCRRI 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g02261 235 Gene3D Vaccinia Virus protein VP39 4 235 IPR029063 -
Viun3g02261 235 PANTHER O-METHYLTRANSFERASE-RELATED 7 235 - -
Viun3g02261 235 Pfam O-methyltransferase 23 235 IPR002935 GO:0008171
Viun3g02261 235 CDD AdoMet_MTases 74 177 - -
Viun3g02261 235 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 10 235 IPR002935 GO:0008171
Viun3g02261 235 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 14 234 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g02261 Viun-Chr3 19701514 19707089 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g02261 3 235 Monolignol Biosynthesis Gene Families AT1G67990 55.365 7.13e-86 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g02261 K00588 K13272 gmx:100813350 354.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g02261 3 19701514 19707089 Viun3g02261 3 19701514 19707089 ECH