Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g02260 ATGAAACCCACGACAACATTCTTCTCCTTCCAAACCTCGATACTTGTTTCTCTTGCCCTAGCGCTTACCCTTACACCGACAACAACGACAAAGTTCCAATTCCACAACACCCTCTCCTTTTCCCCACTCGCCACTCTCTTTGTCACCCTCTTCGCTCTTTCCCTTAACTACTGGCTTGTCCCTGGAGGTTTTGCATGGAGAAACTATCGATTCCAACATCATTCCAACAACGAAAAACCAAACGCAAAGCTTTCTGGGCCTATGGGCTGGCCCATACTGGGCTCTCTGCCTCTAATGGGATCTCTGGCGCACGCCAAACTCGCTGCTTTAGCCGCGTCGTTAAACGCCAAGAGGATAATGGCGTTCAGCCTGGGACCCACTCCGGTTGTTATAAGCAGCCACCCCGAGACTGCCAGACAAATCTTATTCGGATCCTCGTTTTCGGATCGTCCCATAAAAGAATCCGCACGCGCTCTCATGTTTGAGCGTGCCATTGGTTTCGCTCCTTCCGGCACCTACTGGAGGCAGCTTCGTAGGATCGCGGCGTTCCATATGTTCTCTCCGAGGAGGATTCAGGGTTTGGAGGGCGTCCGGCAGCGAGTGGCTGATGACATGGTGAAGAGCGCGTGGAAGGAGATGGAGGAGAAAGGGGTGGTGGAAATTCGGCGCATGCTTCAGGAAGGATCTCTGTTGAATATTTTGGAGAGTGTTTTTGGGAATAATGATAAGAGTGAGGAGTTGGGTGATATGGTTAAGGAAGGGTACGAGTTGATTGCGAAGTTCAACTTGGAAGATTATTTTCCTCTTAAGTTTTTGGACTTTCATGGGGTGAAGAGAAGGTGCCACAAGTTGGCGGCTAAGGTGGTTAGTGTTGTGGGGCAAATTGTGGAGGAGCGAAAACGAGATGGGAGTTTTGTTGGGAAGAATGATTTTCTTAGCACTTTGTTATCCTTACCCAAAGAAGAAAGGTTGGATGATTCAGATATGGTGGCTATTCTGTGGGAAATGGTATTTCGAGGAACAGACACAGTTGCAATACTCCTAGAATGGGTCATGGCCAGGATGGTTTTACACCAAGACGTACAAAAGAAAGCCCGCGAAGAAATCAACACGTGCGTCAGCCAAAATCGTCACGTGCGAGACTCGGATATTGCGAACCTGCCTTACCTACAGTCCATAGTGAAAGAAGTTCTCCGACTGCACCCACCGGGTCCACTACTATCGTGGGCCCGCCTCGCGGTCCACGATGTCCACGTGGATAAAGTACTTGTGCCAGCTGGCACAACAGCCATGGTTAACATGTGGGCAATATCGCATGACTCCTCCATCTGGGAAGACCCATGGGCTTTCAAGCCCGAGAGGTTCTTAGCAGAAGACGTTTCCATCATGGGGTCGGACTTGAGGCTGGCCCCCTTCGGAGCTGGACGTAGGGTGTGTCCGGGCAGGGCCTTGGGCTTGGTCACGGCCCATCTCTGGCTCGCGCAACTTCTCCGCCACTTCACATGGCTCCCGGCGGAACATGTGGATCTTTCGGAATGCCTTAGGCTTTCCATGGAAATGAAGACCCCTCTGCGATGCGTAGTGGTTCGTAGATAA 1596 0.5119 MKPTTTFFSFQTSILVSLALALTLTPTTTTKFQFHNTLSFSPLATLFVTLFALSLNYWLVPGGFAWRNYRFQHHSNNEKPNAKLSGPMGWPILGSLPLMGSLAHAKLAALAASLNAKRIMAFSLGPTPVVISSHPETARQILFGSSFSDRPIKESARALMFERAIGFAPSGTYWRQLRRIAAFHMFSPRRIQGLEGVRQRVADDMVKSAWKEMEEKGVVEIRRMLQEGSLLNILESVFGNNDKSEELGDMVKEGYELIAKFNLEDYFPLKFLDFHGVKRRCHKLAAKVVSVVGQIVEERKRDGSFVGKNDFLSTLLSLPKEERLDDSDMVAILWEMVFRGTDTVAILLEWVMARMVLHQDVQKKAREEINTCVSQNRHVRDSDIANLPYLQSIVKEVLRLHPPGPLLSWARLAVHDVHVDKVLVPAGTTAMVNMWAISHDSSIWEDPWAFKPERFLAEDVSIMGSDLRLAPFGAGRRVCPGRALGLVTAHLWLAQLLRHFTWLPAEHVDLSECLRLSMEMKTPLRCVVVRR 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g02260 531 Pfam Cytochrome P450 86 514 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g02260 531 SUPERFAMILY Cytochrome P450 86 531 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g02260 531 PRINTS E-class P450 group I signature 469 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g02260 531 PRINTS E-class P450 group I signature 113 132 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g02260 531 PRINTS E-class P450 group I signature 433 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g02260 531 PRINTS E-class P450 group I signature 479 502 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g02260 531 PRINTS E-class P450 group I signature 391 409 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g02260 531 PRINTS E-class P450 group I signature 328 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g02260 531 PRINTS E-class P450 group I signature 348 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g02260 531 Gene3D Cytochrome P450 69 529 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g02260 531 PANTHER CYTOCHROME P450 78A7-RELATED 31 531 - -
Viun3g02260 531 PRINTS P450 superfamily signature 392 403 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g02260 531 PRINTS P450 superfamily signature 339 356 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g02260 531 PRINTS P450 superfamily signature 470 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g02260 531 CDD CYP78 117 524 - -
Viun3g02260 531 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 472 481 IPR017972 GO:0005506|GO:0016705
Viun3g02260 531 FunFam Cytochrome P450 78A5 76 531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g02260 Viun-Chr3 19653307 19655721 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g02260 32 531 Cytochrome P450 AT1G13710 52.713 2.07e-180 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g02260 - - gmx:100817944 879.396