Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g02202 ATGGCAGAGAGTGTAGTTTCCTTTGTTTTGGATCACTTATCTCAGCTTGTGGCACGCGAAGCTAACTTGCTTTATGGCGTGGAGGACAGGATCCAGTCCCTCCAGCACGAGCTTCAAATGATCAACGACCTCCTCAATACCTCAAAGAACAAGAAGGGAACAGCACACACAATACTGAACCAAATCAGAGATGTGGCCCACGTAGCTGAGGATGTCATCGACACATTCGTAGCCAAAGTTTCCATTTACAAGAGGAGAACCATTCTTGGGAAGATGCTCCGTGGCTTTGGCCAAGCAAGGTTGCTTCGCGACGTAGCCGAAAAAATAGACAAGATCAAAGCCACTCTCACCGAAATACGCAACAACAAAGACAAATATGACGCTTTCAAAGAAACCAGTAATCAATCCGCAGCAGAAGAAGAGGAAGAGGAGAAAAGGGCGAAATCAGTGCAGAAGCTAAGAAGAAATGTGGAGGAAGAAGATGTGGTTGGCTTTGTCCACGACTCCAAGGATGTCATCAACCGACTCCTGGAAGGTGGTTCAAATCGTAAAGCTGTATCTATCGTTGGCATGGGGGGATTGGGGAAGACCACCCTTGCCCGAAAGGTTTACCACAGCAGCCAGGTGAAGCAACGATTCGTGTGTCGGGCGTGGGTTTATGTGTCAAACGAGTGCAGATCTAAGGAGCTTTTAATTGGCCTTCTTAAGCATTTGATGCCAAATTTTGAACAACAAGGCAGAGGTAAGGAAAAAGGTAAGAAAAGCGCAGGAGACATTAACGACCTTAGTGAGGAGGAGCTGAAGAAATTGGTGCGGAACTGCTTGGAGTGGAAAAGGTACCTTGTGGTGGTAGATGACCTGTGGAAAAAGCAAGATTGGGATGAGGTGCAAGATGCTTTTCCGGACAACAACAGAGGCAGCAGAATCTTGATCACCAGTCGTTTGAAAGAGGTGGCCTTGCATGCTGCCCATGATGTTCCTCACTATCTTCAATTCCTCAATGAAGAAGAAAGTTGGAAGTTGTTTCGCAGGAAAGTGTTTAGGGGTGAAGATTGCCCTTCTGATTTGGAGGCTCTGGGAAAGCAGATGGTTCAAAGTTGTCGTGGTTTACCACTCTCCATCATTGTCTTAGCCGGGCTACTGGCCAACAAGAAAAAGTCACATAGAGAATGGTCTAAAGTTGTGGGTCATGTTAATTGGTATCTTACTCAGGACGAGACCCAAGTGAAGGATATAGTTCTCAAACTCAGCTATGACAATTTACCAAGGAGACTAAAACCATGTTTTCTCTATCTTGGGTTATTCTCTGAAGACTTTGAAATACCAGTTACGCCATTGTTGCAAAAATGTGTTGCTGAGGGTTTTATACAAGATACAGGGAGCAGAGACCTAGATGACGTTGCAGAAGACTACTTGTACGAGCTCATTGATCGTAGTTTGGTCCAAGTAGCAAAAGTGGATACTAATGGAGATGTGACGGCGATTCGAGTTCATGATCTTCTTCGAGATCTTTGCATATTAGAGAGCAAGGAGGACAAAGTTTTTGAAGTTTGCACAGACCATAATATTCTAATTCCAGCAAAACCTCGCAGACTGTCTATTCACAGTAATATGGATCACTACATTTCTTCAAGCAACAATGATCATTCATGTGTTCGTTCCCTGTTCTTCTTTGGCTCATATTACTTTTTTCAAAGTTGGGAATGGAAATGGCTTTTTGAAAGATTGAAATTGGTTCGTGTGTTGGACTTTGGACTAAACACCTCTAATAAGATCCCTTCCGATATAGGGAACTTTATCCATTTAAGGTACCTTAGAATACAAGCACTCTCTATTACATTTGTTCCAAATTCGATACTTAACCTTTGGAATTTACAAACCATAGACCTAGGTCCTTGGAAGCATAGAGTTCCAATTTCTTTCCCTGCCCAAATATGGAAACTGAAACATTTAAGGCATTTGAATACAACACGGGCTATCAAGCTGCGAGGCAGTTGTTCAGGATCAGATGAGAGGATGTGGAATCTTCAAACCGTGTCTACCCTGGTGCTCAATAGCCAAGCAACATCTCTGATAGAAAAAGGAACATTCCCCAATGTTAAGGAGCTAGGGTTGACAGTGATTTCTGAATGCGAAGGTGAATTACCCAAATTGTTGCATAGCTTACAACAATTAAGTTATTTGAACATGTTAGTGATTGTCCTCCGAGATAGAGATGATGCAGGTGTAGAGCACTCGAGCGATGAAAGTGTGAAAAGGAACAATGGTTTCAAGCCGCAAGAATTGTTACGAAACCTAGGACAATTGAATTGTCTAACCATCTTAACCATTGAGAATGCTTTGGACCTTCTAACCTGTGCGCTCACATTCCCTCCAAATGTTACAGAGTTAACGTTGTCAGATATTGACTGCATTAGTGATGAGGGGATGAATGGTTTGGGAAAGCACACCAAACTCAAAATTTTGAGACTTTGTGGAGATAATATAACTTCATCTGGGGATTCCATTGTCCTTAATTGTGGTAGAGGCAGCTTTCCACAACTGGAAGTGGTTGAAATGGAAAATTTGAAACTTGGAAAGTGGAAATTGGACAATGGTGCCATGTCGAGGCTGCAAAATGTGATGATCAACAGTTGTGAATGGTTAGAAGATCTCCCAAATGAATTGTGGTCTTTGAGTGGTTTGAAAAAAGTTCACGTGAAGAATCCCTCGGTACAAATGGCTCGAATGCTAGAAAATTTGGAAATAAACAGTGGGTGTCAACTCGTAATAGAAAATTAG 2781 0.4254 MAESVVSFVLDHLSQLVAREANLLYGVEDRIQSLQHELQMINDLLNTSKNKKGTAHTILNQIRDVAHVAEDVIDTFVAKVSIYKRRTILGKMLRGFGQARLLRDVAEKIDKIKATLTEIRNNKDKYDAFKETSNQSAAEEEEEEKRAKSVQKLRRNVEEEDVVGFVHDSKDVINRLLEGGSNRKAVSIVGMGGLGKTTLARKVYHSSQVKQRFVCRAWVYVSNECRSKELLIGLLKHLMPNFEQQGRGKEKGKKSAGDINDLSEEELKKLVRNCLEWKRYLVVVDDLWKKQDWDEVQDAFPDNNRGSRILITSRLKEVALHAAHDVPHYLQFLNEEESWKLFRRKVFRGEDCPSDLEALGKQMVQSCRGLPLSIIVLAGLLANKKKSHREWSKVVGHVNWYLTQDETQVKDIVLKLSYDNLPRRLKPCFLYLGLFSEDFEIPVTPLLQKCVAEGFIQDTGSRDLDDVAEDYLYELIDRSLVQVAKVDTNGDVTAIRVHDLLRDLCILESKEDKVFEVCTDHNILIPAKPRRLSIHSNMDHYISSSNNDHSCVRSLFFFGSYYFFQSWEWKWLFERLKLVRVLDFGLNTSNKIPSDIGNFIHLRYLRIQALSITFVPNSILNLWNLQTIDLGPWKHRVPISFPAQIWKLKHLRHLNTTRAIKLRGSCSGSDERMWNLQTVSTLVLNSQATSLIEKGTFPNVKELGLTVISECEGELPKLLHSLQQLSYLNMLVIVLRDRDDAGVEHSSDESVKRNNGFKPQELLRNLGQLNCLTILTIENALDLLTCALTFPPNVTELTLSDIDCISDEGMNGLGKHTKLKILRLCGDNITSSGDSIVLNCGRGSFPQLEVVEMENLKLGKWKLDNGAMSRLQNVMINSCEWLEDLPNELWSLSGLKKVHVKNPSVQMARMLENLEINSGCQLVIEN 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g02202 926 CDD RX-CC_like 2 121 IPR038005 -
Viun3g02202 926 Gene3D - 139 326 IPR027417 -
Viun3g02202 926 FunFam Probable disease resistance protein At1g63360 418 507 - -
Viun3g02202 926 Pfam NB-ARC domain 170 420 IPR002182 GO:0043531
Viun3g02202 926 Coils Coil 140 160 - -
Viun3g02202 926 Gene3D - 332 417 IPR042197 -
Viun3g02202 926 PANTHER DISEASE RESISTANCE PROTEIN RP 31 863 IPR044974 GO:0006952
Viun3g02202 926 Gene3D - 5 96 - -
Viun3g02202 926 FunFam Probable disease resistance protein At1g61300 144 327 - -
Viun3g02202 926 Pfam Rx N-terminal domain 5 81 IPR041118 -
Viun3g02202 926 SUPERFAMILY L domain-like 496 903 - -
Viun3g02202 926 Coils Coil 31 51 - -
Viun3g02202 926 Gene3D - 418 507 IPR036388 -
Viun3g02202 926 FunFam Probable disease resistance protein At5g66910 332 419 - -
Viun3g02202 926 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 432 IPR027417 -
Viun3g02202 926 PRINTS Disease resistance protein signature 367 381 - -
Viun3g02202 926 PRINTS Disease resistance protein signature 185 200 - -
Viun3g02202 926 PRINTS Disease resistance protein signature 274 288 - -
Viun3g02202 926 PRINTS Disease resistance protein signature 620 636 - -
Viun3g02202 926 Coils Coil 102 122 - -
Viun3g02202 926 Gene3D Ribonuclease Inhibitor 536 925 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g02202 Viun-Chr3 18638072 18641121 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g02202 184 504 WRKY Transcription Factor Family AT5G45050 25.155 4.37e-09 58.5