Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g02170 ATGGTAAATGAAGGTAGTTGTTTCCCCACGATGGATCTGCTACGGTCGGAGCCTATGCAAATGGCTCAATTGATCATTCCAACCGAATCAGCTCATCGAGCCATCTCTTACCTTGGCAATCTCGGCCTCTTCCAATTCATAGATCTCAATGTAGATAAAAGTCCATTCCAGCGAACTTATGCTTCTCAGATTAAACGATGTGGGGAAATGGCGCGTAGGCTACGGTTGTTTAAGGACCAAATGTTGAAAGCAGGCGTGTCACCCTCAATGAGCACAGCAAGAGAGGATAATGTTGATCTGGAAAGTTTGGAGGTTAAACTTGAAGAACTTGAAGCCGACCTCCTTGAGATAAATGCAAATAATGAGAAGTTGAAGCACACTTACAATGAGCTATCAGAGTATAAGCTTGTTCAAGAGAAGGTTGGTGAATTTTTCTCTTCAGCAAAAAATAATGCCGTAGCTCAACAGAGAAAGCTTGAAGTACAGATAACTGTTGAAAGGTCTATTGACAGCCCATTACTATTGGAACAGGAGGAGACGTCAGCAAAGCAAATTAAGCTGGGCTTCATCAGTGGACTTGTTTCAAGGGAAAAATCAGTTCCTTTCGAAAGAATTCTATTTCGTGCTACTAGGGGAAACGTGTTTCTCAAACAAGCTGTGGTTGATCATTCTGTTCTTGATCTTTCGTCAGAAGAGAAGGTTCATAAAAATGTATTTGTCGTCTTTTATTCTGGAGAGAGTGTTAAAAGTAAAATTCTGAAAATATGTGATGCTTTTGGAGCAAATCGTTATCCTTTCTCAGATGACTTGAGTAAACAACTTCAGACAATAACAGAGGTTTCAGGAAGACTTTCAGAATTGAAGACTACAATAGATGCAGGATTGCTTCACCGGAGCACTCTGTTGCAGACAATTGCAGATCACTATGAGCAGTGGAGCCTTCAGTTGAAGAAGGAAAAGTCAATTTATCACACTCTAAATATGCTTAGCATTAATGTGACAAAGAAATGTCTCCTTGCAGAAGGTTGGTGTCCTGTTTTTGCGACAAGCCAGATTCACAAAGTATTGCAGCAGGCAACTGTGGAATGCAGTTCTCAAGTTGAGGCCATATTTCAGGTCTTAGAGACAAAGGAATCACCGCCTACCTACTTCTGCACAAACAAATTCACTTCTGCTTTTCAAGAAATTGTAGATGCCTATGGAATCGCCAAGTACCGGGAAGCGAATCCCGGTGTGTACACAATTATCACTTTTCCATTCCTTTTTGCTGTAATGTTTGGTGACTGGGGGCATGGCATATGCCTATTACTGGCGGCTTTGTATCTCGTAATCAGAGAGAAAAAATTTTCAAGTCAGAAACTTGGAGACATAATGGAAATGGCTTTCGGTGGACGCTATATTATTATGATGATGGCACTCTTTTCAATCTATACCGGGTTGATATATAATGAGTTCTTCTCCGTTCCATTTGAATTATTTGCTCCATCTGCCTATGGATGTCGTGATTCTTCATGCGGGGATGCTTCTACCATAGGTTTAATAAAAGTGCGTGACACATATCCGTTTGGTGTGGATCCCAAATGGCACGGTACTCGGAGTGAACTCCCATTTCTTAATTCTTTGAAGATGAAGATGTCAATTCTGCTGGGGGTATCCCAGATGAATCTTGGAATCATAATGAGTTACTATAATGCAAAATACTTCGAAAACGATATAAATATCTGGTACCAGTTCGTTCCCCAGATGATATTCTTAAATAGCATGTTTGGCTACCTTTCACTCCTCATAATTGTAAAATGGAGCACTGGATCACAGGCCGACCTGTATCATATACTTATATATATGTTCCTTAGCCCAACTGATGATTTAGGTGAAAACCAGCTTTTTTTTGGTCAACAGCTCCTTCAACTTGTGTTACTACTGTTGGCACTTGTTGCCGTACCATGGATGCTAGTACCAAAGCCCTTTCTCCTGCAGAAGCAACATAGAGAAAGGCATCAAGGTCAATCTTACTCTTTGTTGTTCAACAAGGATGATCCTGACGAATCAGAGTCACAAAGTGTTCCCTGTGACACTGACGATGAGTTTGATTTCAGCGAGGTTTTTGTGCACCAACTTATACATACAATCGAATTTGTGCTTGGAGCTGTGTCTAATACAGCTTCGTATCTACGTTTGTGGGCCCTCAGAGGTGATGGCAGCAAATGTGCAACGACGGTGGCGGCAATGATGTGA 2235 0.4121 MVNEGSCFPTMDLLRSEPMQMAQLIIPTESAHRAISYLGNLGLFQFIDLNVDKSPFQRTYASQIKRCGEMARRLRLFKDQMLKAGVSPSMSTAREDNVDLESLEVKLEELEADLLEINANNEKLKHTYNELSEYKLVQEKVGEFFSSAKNNAVAQQRKLEVQITVERSIDSPLLLEQEETSAKQIKLGFISGLVSREKSVPFERILFRATRGNVFLKQAVVDHSVLDLSSEEKVHKNVFVVFYSGESVKSKILKICDAFGANRYPFSDDLSKQLQTITEVSGRLSELKTTIDAGLLHRSTLLQTIADHYEQWSLQLKKEKSIYHTLNMLSINVTKKCLLAEGWCPVFATSQIHKVLQQATVECSSQVEAIFQVLETKESPPTYFCTNKFTSAFQEIVDAYGIAKYREANPGVYTIITFPFLFAVMFGDWGHGICLLLAALYLVIREKKFSSQKLGDIMEMAFGGRYIIMMMALFSIYTGLIYNEFFSVPFELFAPSAYGCRDSSCGDASTIGLIKVRDTYPFGVDPKWHGTRSELPFLNSLKMKMSILLGVSQMNLGIIMSYYNAKYFENDINIWYQFVPQMIFLNSMFGYLSLLIIVKWSTGSQADLYHILIYMFLSPTDDLGENQLFFGQQLLQLVLLLLALVAVPWMLVPKPFLLQKQHRERHQGQSYSLLFNKDDPDESESQSVPCDTDDEFDFSEVFVHQLIHTIEFVLGAVSNTASYLRLWALRGDGSKCATTVAAMM 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g02170 744 PIRSF ATP6V0A1 9 730 IPR026028 GO:0000220|GO:0046961
Viun3g02170 744 Coils Coil 93 127 - -
Viun3g02170 744 PANTHER VACUOLAR PROTON ATPASES 13 730 IPR002490 GO:0033179|GO:0046961|GO:1902600
Viun3g02170 744 Pfam V-type ATPase 116kDa subunit family 37 729 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g02170 Viun-Chr3 18227194 18247864 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g02170 11 729 Primary Pumps ATPases(2) AT4G39080 71.528 0.0 1076
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g02170 K02154 - gmx:100805813 1241.87