Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g02167 ATGGCACACCTGAACCAGCCATTCACAGTTACTTTCCTTTGTATCCTTTTATCTCTTGCTGCAGTTGATCCATCTTTGGCTCTGCATAAACCCTCAAACCAAAACCAAACAATGGCTTACATAGAGTCCTCTTGCCAAGGAACAAGGTTCCCTGATCTGTGTATACGTTGCCTAGCCAGATTTTCAAATTCCACCATTGATGGCCCTCAGCACTTGGCCCATCTTGCCCTTTCGGTGAGCCTCTTAAGGGCACTAAAAACTAGGGCATACTTGGCAAAAGTGGCAAAGGAACTTGAAGAGTTCAAGAAGGATAGAGTGTACCTTACTGTGCAAGATTGTGTGACCCAACTCAGTGATAGTGTTGACCAACTTTGCCAAGCCATCAAAGAACTTCGCAGGATGAACAAAAGCAGCATCATAGATGACAACTTCTTGTGGCACATAAGCAACGTTGAGACATGGGTAAGCACTGCCTTAACAGATGCTAGCTATTGTGTTCAATCTTTCCCTGGAAAAAGGATGAGTAAGAGGACTGCTACTATAAAGTTTAAGGCACAAAATGTTGCAGAGGTCACTAGTAATGCTCTGAATTTATTTCACAGATATGCTTCTAGTTACCATGTAGCAGCTGGAACCACCATCAAACCCTAA 651 0.4332 MAHLNQPFTVTFLCILLSLAAVDPSLALHKPSNQNQTMAYIESSCQGTRFPDLCIRCLARFSNSTIDGPQHLAHLALSVSLLRALKTRAYLAKVAKELEEFKKDRVYLTVQDCVTQLSDSVDQLCQAIKELRRMNKSSIIDDNFLWHISNVETWVSTALTDASYCVQSFPGKRMSKRTATIKFKAQNVAEVTSNALNLFHRYASSYHVAAGTTIKP 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g02167 216 Pfam Plant invertase/pectin methylesterase inhibitor 40 198 IPR006501 GO:0004857
Viun3g02167 216 FunFam Pectinesterase inhibitor 3 36 203 - -
Viun3g02167 216 CDD PMEI-like_3 43 204 - -
Viun3g02167 216 Gene3D Invertase/pectin methylesterase inhibitor family protein 36 202 IPR035513 -
Viun3g02167 216 PANTHER PECTINESTERASE INHIBITOR-LIKE 11 198 - -
Viun3g02167 216 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 40 202 IPR035513 -
Viun3g02167 216 SMART PMEI_2 36 198 IPR006501 GO:0004857
Viun3g02167 216 NCBIfam pectinesterase inhibitor domain 8 201 IPR006501 GO:0004857
Viun3g02167 216 Coils Coil 114 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g02167 Viun-Chr3 18175072 18176012 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g02167 24 199 Carbohydrate Esterase AT3G49220 28.889 3.01e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g02167 - - pvu:PHAVU_002G180000g 293.893