Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g02151 ATGCCAACTGATCCCGATCAAGCACTCACCAAATGTACAAGTGAAAGCTCCACTTTGAAGCCAGAGCACAGAACCAAGGTTGTTAGGAACAAGATTTCCACACCCTCACACCCTCCTACGTCACTCAAAGCACTACCACCCAAACCATCATACCCAAAAAGCATGAAACTTCCATTAATAGCCTCTGTTTTGGCTGCGTCGTTGTTACTATTGTCGTTCGTCATCGGATTCATAATCTTCCGATGCGTAAGAAGAGTTAAATCCGAGAGAGATAGCAACTCGGAGTCTTCAAGCACGCGCTGCCGCGAGTTTTCTCTGGCGGAGATAAGAGCAGCCACCAACAACTTCGACGAGCGTTTAATCGTGGGCAGAGGAGGGTTCGGGAACGTGTACAAGGGACACATCGACACGAGTCACAAGCCCGTGGCCATCAAGCGGCTCAAACCGGGTTCGGACCAGGGCGCACACGAGTTCCAAACCGAGATCAGGATGCTCTCGCGGTTCCGCCACGTGCACTTGGTTTCGCTCATCGGGTACTGCAACGACGGCAGAGAAATGATCCTCGTCTACGATTTCATGGCGCGTGGGACCCTCCGAGACCACTTGTACGGCTCAGGCGAGGCGCTGTTGTGGGAGCGGCGGCTGAAGATCTGCCTGGAGGCCGCACGTGGGCTTGAATTCCTCCACACCGGCGTGGGGCGGCAGAGCGTAATCCACCGTGACGTGAAGAGCACAAACATCCTGCTTGACGAGAATTGGGTGGCGAAGGTATCGGATTTCGGGTTGTCAAAGGTGGGACCGAACGCGTCTCACGTGACAACAGACGTGAAGGGTAGTTTGGGATACTTGGATCCTGAGTACTATATGAGTCTTTGGTTGACGCAGAAATCTGACGTGTACTCTTTCGGCGTGATTTTGCTTGAGGCATTGTGTGGGAGAGCCCCTATAGCGAGCAGGGTGGAGAAGGAGCAGGAGTTTTTGGTGGCGTGGGTGAAGCGGTGTTTTCACGGTGGGAATGTTCATGAGACGGTGGATCCAGTTTTGAAAGGTAGCATGCGCCCCAAGTGTTTGAATAAATTCGTGGAGATTGCTCTGAGTTGTTTGAATGATCATGGGAAGGACCGGCCTCTGATGAGAGAGGTGGTGAAGGGGTTGGAGTATGCGTTGAATTTGCAACGCCGCTGCGAGCAAGGTGAACGGGAAATTGGGTTGACAGAAATGGAGCGTCATGGCGAATTTGACGACAAATTTGCTTCTACCAGCAGTAAGGCTACGACGACATGCAGTGAGGAGGAACAAGCTTTGGTGCATGCCATGTTCTCTGACCTTGGAAATGGAAATCAAAGACCACGGTAA 1356 0.5229 MPTDPDQALTKCTSESSTLKPEHRTKVVRNKISTPSHPPTSLKALPPKPSYPKSMKLPLIASVLAASLLLLSFVIGFIIFRCVRRVKSERDSNSESSSTRCREFSLAEIRAATNNFDERLIVGRGGFGNVYKGHIDTSHKPVAIKRLKPGSDQGAHEFQTEIRMLSRFRHVHLVSLIGYCNDGREMILVYDFMARGTLRDHLYGSGEALLWERRLKICLEAARGLEFLHTGVGRQSVIHRDVKSTNILLDENWVAKVSDFGLSKVGPNASHVTTDVKGSLGYLDPEYYMSLWLTQKSDVYSFGVILLEALCGRAPIASRVEKEQEFLVAWVKRCFHGGNVHETVDPVLKGSMRPKCLNKFVEIALSCLNDHGKDRPLMREVVKGLEYALNLQRRCEQGEREIGLTEMERHGEFDDKFASTSSKATTTCSEEEQALVHAMFSDLGNGNQRPR 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g02151 451 SUPERFAMILY Protein kinase-like (PK-like) 98 383 IPR011009 -
Viun3g02151 451 CDD STKc_IRAK 122 386 - -
Viun3g02151 451 ProSitePatterns Serine/Threonine protein kinases active-site signature. 237 249 IPR008271 GO:0004672|GO:0006468
Viun3g02151 451 FunFam Receptor-like protein kinase FERONIA 88 192 - -
Viun3g02151 451 MobiDBLite consensus disorder prediction 1 16 - -
Viun3g02151 451 PANTHER OS07G0166700 PROTEIN 100 392 IPR045272 GO:0004714|GO:0006468
Viun3g02151 451 FunFam Receptor-like protein kinase FERONIA 193 406 - -
Viun3g02151 451 SMART serkin_6 116 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun3g02151 451 Gene3D Transferase(Phosphotransferase) domain 1 193 407 - -
Viun3g02151 451 MobiDBLite consensus disorder prediction 1 47 - -
Viun3g02151 451 Pfam Protein tyrosine and serine/threonine kinase 122 384 IPR001245 GO:0004672|GO:0006468
Viun3g02151 451 ProSiteProfiles Protein kinase domain profile. 116 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun3g02151 451 ProSitePatterns Protein kinases ATP-binding region signature. 122 145 IPR017441 GO:0005524
Viun3g02151 451 Gene3D Phosphorylase Kinase; domain 1 78 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g02151 Viun-Chr3 17955865 17957925 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g02151 69 415 Receptor kinase-like Gene Family AT3G51550 50.392 4.59e-119 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Viun3g02151 PK_Tyr_Ser-Thr 8.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g02151 - - gmx:100792589 588.186