Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g02017 ATGGAGATGAGTATGTTGGCTCCTTCCTTCTCTGGCTTCGCTAAACCCTCTGCATCTGTAAAACCTTCTCGTCTTACGCTCAGGGCATCTTCTCTGCGCCATGACTACCCTCTTGCCAGCAAAATTGTTGTTAAAAATTTACCATATTCTACTGGTGAGACTACTTTGCAAAAGGAATTTTCTGATTTTGGCAAGATAGCTGAAGTTAAAATGGTTAAAGATATGAAAACAAAAAGATCTAAGGGTATTGCTTTCATTCAATATACATGCCAAGATGATGCCATGCTTGCACTAGAAACCATGGATCAGAAGGATTTTTATGGTAGAAGAATCTATGTGGAAATTGCTAGATTGGGTTGGGATTATTTTGGTGCAACCCCAAGGGCCTCAGGACCCCCAAAGAAGTGGGATTTGCCACAGCAAGAAGAAGTGGTAGATTGTTGGTACTGA 450 0.4111 MEMSMLAPSFSGFAKPSASVKPSRLTLRASSLRHDYPLASKIVVKNLPYSTGETTLQKEFSDFGKIAEVKMVKDMKTKRSKGIAFIQYTCQDDAMLALETMDQKDFYGRRIYVEIARLGWDYFGATPRASGPPKKWDLPQQEEVVDCWY 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g02017 149 FunFam glycine-rich RNA-binding protein 4, mitochondrial 28 143 - -
Viun3g02017 149 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 40 118 IPR000504 GO:0003723
Viun3g02017 149 SUPERFAMILY RNA-binding domain, RBD 39 119 IPR035979 GO:0003676
Viun3g02017 149 PANTHER U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KD 40 137 - -
Viun3g02017 149 SMART rrm1_1 41 114 IPR000504 GO:0003723
Viun3g02017 149 Gene3D - 24 142 IPR012677 -
Viun3g02017 149 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 42 111 IPR000504 GO:0003723
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g02017 40 121 Eukaryotic Initiation Factors Gene Family AT2G36660 36.585 2.87e-09 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g02017 - - pvu:PHAVU_002G189500g 278.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g02017 3 16069496 16075199 Viun3g02017 3 16069496 16075199 ECH