Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g01991 ATGAAGGGCAGTGGCTGCAGTGAAGCATCATCTGGCGGAGGAAACATGAATGTGAAACCTGCATGGCTAGAGAGGCTTATGGCTGAGACATTCTTTGGCAATTGTGGGGTCCACCAGAATCAAAAGAAGAACGAGAAGAACGTCTTTTGCTTGCACTGTTACCTTAGCATCTGCCCCCACTGTCTCCCTTCTCACCGTTCCCATTCCCTTCTCCAGGTGAGAAGGTATGTGTACCATGACGTGGTTCGATTGGGTGATCTAGAAAAGCTCGTCGATTGCGCCAATATTCAGCCATACACCATTAACGGTGCCAAAGTGATATTCTTAAATCAGAGGCCACAGTCAAGGTCATTTAAAGGCACTGCCAACACTTGCTGCACTTGTGACAGGATTCTTCAGGAGCCCTTTCACTTCTGTTCTCTGTCATGCAAGTTTGAGGGTCTAAGTGTTGATTGCTATACCCAATTTGTCCCCACTTCCTCTGAGGCTACCACTAGCATGCCCAACAATAACAACAATAACAATAAGAACAAGAACAAGAACAAGCAGAACACAAATGGCTTCTTCATCTCTCTTGGAAGCAGAAGAAAGGGGGCTCCCCATAGAGCTCCTCTTTCCTAG 621 0.467 MKGSGCSEASSGGGNMNVKPAWLERLMAETFFGNCGVHQNQKKNEKNVFCLHCYLSICPHCLPSHRSHSLLQVRRYVYHDVVRLGDLEKLVDCANIQPYTINGAKVIFLNQRPQSRSFKGTANTCCTCDRILQEPFHFCSLSCKFEGLSVDCYTQFVPTSSEATTSMPNNNNNNNKNKNKNKQNTNGFFISLGSRRKGAPHRAPLS 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g01991 206 MobiDBLite consensus disorder prediction 163 191 - -
Viun3g01991 206 Pfam PLATZ transcription factor 74 144 IPR006734 -
Viun3g01991 206 MobiDBLite consensus disorder prediction 163 206 - -
Viun3g01991 206 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 17 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g01991 Viun-Chr3 15847915 15851771 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Viun3g01991 PLATZ 5.5e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g01991 - - gmx:102668349 345.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g01991 3 15847915 15851771 Viun3g01991 3 15847915 15851771 ECH